RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 ANO4Q32M45 955 aa20.12■□□□□ 0.81
PTCH1-227ENST00000553256 PTPN20Q4JDL3 420 aa20.12■□□□□ 0.81
PTCH1-227ENST00000553256 CAVIN1Q6NZI2 390 aaKnown RBP20.12■□□□□ 0.81
PTCH1-227ENST00000553256 TOGARAM2Q6ZUX3 1019 aa20.12■□□□□ 0.81
PTCH1-227ENST00000553256 ATRIPQ8WXE1 791 aa20.12■□□□□ 0.81
PTCH1-227ENST00000553256 FCRL2Q96LA5 508 aaPredicted RBP20.12■□□□□ 0.81
PTCH1-227ENST00000553256 ERGIC2Q96RQ1 377 aa20.12■□□□□ 0.81
PTCH1-227ENST00000553256 EBF1Q9UH73 591 aa20.12■□□□□ 0.81
PTCH1-227ENST00000553256 MMP17Q9ULZ9 603 aa20.12■□□□□ 0.81
PTCH1-227ENST00000553256 SLC27A6Q9Y2P4 619 aa20.12■□□□□ 0.81
PTCH1-227ENST00000553256 DCHS1Q96JQ0 3298 aa20.11■□□□□ 0.81
PTCH1-227ENST00000553256 SART1O43290 800 aaKnown RBP20.11■□□□□ 0.81
PTCH1-227ENST00000553256 CHKAP35790 457 aa20.11■□□□□ 0.81
PTCH1-227ENST00000553256 PITX1P78337 314 aaPredicted RBP20.11■□□□□ 0.81
PTCH1-227ENST00000553256 SRSF5Q13243 272 aaKnown RBP20.11■□□□□ 0.81
PTCH1-227ENST00000553256 HSF5Q4G112 596 aaPredicted RBP20.11■□□□□ 0.81
PTCH1-227ENST00000553256 ANO6Q4KMQ2 910 aa20.11■□□□□ 0.81
PTCH1-227ENST00000553256 C2orf27AQ580R0 203 aa20.11■□□□□ 0.81
PTCH1-227ENST00000553256 FAM133BQ5BKY9 247 aaKnown RBP20.11■□□□□ 0.81
PTCH1-227ENST00000553256 OLFML1Q6UWY5 402 aa20.11■□□□□ 0.81
PTCH1-227ENST00000553256 TMEM92Q6UXU6 159 aa20.11■□□□□ 0.81
PTCH1-227ENST00000553256 NOP9Q86U38 636 aaKnown RBP20.11■□□□□ 0.81
PTCH1-227ENST00000553256 RASSF3Q86WH2 238 aa20.11■□□□□ 0.81
PTCH1-227ENST00000553256 PASD1Q8IV76 773 aa20.11■□□□□ 0.81
PTCH1-227ENST00000553256 C1orf131Q8NDD1 294 aaKnown RBP20.11■□□□□ 0.81
PTCH1-227ENST00000553256 CCDC26Q8TAB7 109 aa20.11■□□□□ 0.81
PTCH1-227ENST00000553256 KCNV2Q8TDN2 545 aa20.11■□□□□ 0.81
PTCH1-227ENST00000553256 EPS8L1Q8TE68 723 aa20.11■□□□□ 0.81
PTCH1-227ENST00000553256 RNF139Q8WU17 664 aa20.11■□□□□ 0.81
PTCH1-227ENST00000553256 AZIN2Q96A70 460 aa20.11■□□□□ 0.81
PTCH1-227ENST00000553256 ACDQ96AP0 544 aa20.11■□□□□ 0.81
PTCH1-227ENST00000553256 SLC2A13Q96QE2 648 aa20.11■□□□□ 0.81
PTCH1-227ENST00000553256 ST7Q9NRC1 585 aa20.11■□□□□ 0.81
PTCH1-227ENST00000553256 NOCTQ9UK39 431 aaKnown RBP20.11■□□□□ 0.81
PTCH1-227ENST00000553256 DMXL1Q9Y485 3027 aa20.11■□□□□ 0.81
PTCH1-227ENST00000553256 SGK1O00141 431 aa20.1■□□□□ 0.81
PTCH1-227ENST00000553256 ERBB2P04626 1255 aa20.1■□□□□ 0.81
PTCH1-227ENST00000553256 TGM1P22735 817 aa20.1■□□□□ 0.81
PTCH1-227ENST00000553256 SEC13P55735 322 aa20.1■□□□□ 0.81
PTCH1-227ENST00000553256 BPIFB4P59827 614 aa20.1■□□□□ 0.81
PTCH1-227ENST00000553256 IQCB1Q15051 598 aa20.1■□□□□ 0.81
PTCH1-227ENST00000553256 NADSYN1Q6IA69 706 aa20.1■□□□□ 0.81
PTCH1-227ENST00000553256 TAC4Q86UU9 113 aa20.1■□□□□ 0.81
PTCH1-227ENST00000553256 ALLCQ8N6M5 410 aa20.1■□□□□ 0.81
PTCH1-227ENST00000553256 AOPEPQ8N6M6 819 aa20.1■□□□□ 0.81
PTCH1-227ENST00000553256 PPP1R13BQ96KQ4 1090 aa20.1■□□□□ 0.81
PTCH1-227ENST00000553256 DNAJC17Q9NVM6 304 aaKnown RBP20.1■□□□□ 0.81
PTCH1-227ENST00000553256 ASNSD1Q9NWL6 643 aa20.1■□□□□ 0.81
PTCH1-227ENST00000553256 PLK2Q9NYY3 685 aa20.1■□□□□ 0.81
PTCH1-227ENST00000553256 MYO18AQ92614 2054 aaKnown RBP20.1■□□□□ 0.81
PTCH1-227ENST00000553256 EML5Q05BV3 1969 aa20.09■□□□□ 0.81
PTCH1-227ENST00000553256 GLI1P08151 1106 aa20.09■□□□□ 0.81
PTCH1-227ENST00000553256 NCAM1P13591 858 aa20.09■□□□□ 0.81
PTCH1-227ENST00000553256 HOXD9P28356 352 aaPredicted RBP20.09■□□□□ 0.81
PTCH1-227ENST00000553256 CNR2P34972 360 aa20.09■□□□□ 0.81
PTCH1-227ENST00000553256 GABRB2P47870 512 aa20.09■□□□□ 0.81
PTCH1-227ENST00000553256 PXNP49023 591 aaPredicted RBP20.09■□□□□ 0.81
PTCH1-227ENST00000553256 YWHAZP63104 245 aaKnown RBP20.09■□□□□ 0.81
PTCH1-227ENST00000553256 RAPGEF1Q13905 1077 aa20.09■□□□□ 0.81
PTCH1-227ENST00000553256 SYCP1Q15431 976 aa20.09■□□□□ 0.81
PTCH1-227ENST00000553256 CRY1Q16526 586 aa20.09■□□□□ 0.81
PTCH1-227ENST00000553256 GRAMD4Q6IC98 578 aa20.09■□□□□ 0.81
PTCH1-227ENST00000553256 MYEOVQ96EZ4 313 aa20.09■□□□□ 0.81
PTCH1-227ENST00000553256 HHIPQ96QV1 700 aa20.09■□□□□ 0.81
PTCH1-227ENST00000553256 ADAM33Q9BZ11 813 aa20.09■□□□□ 0.81
PTCH1-227ENST00000553256 POPDC2Q9HBU9 364 aa20.09■□□□□ 0.81
PTCH1-227ENST00000553256 ZDHHC4Q9NPG8 344 aa20.09■□□□□ 0.81
PTCH1-227ENST00000553256 SMG5Q9UPR3 1016 aaKnown RBP20.09■□□□□ 0.81
PTCH1-227ENST00000553256 SLC8A2Q9UPR5 921 aa20.09■□□□□ 0.81
PTCH1-227ENST00000553256 DAAM1Q9Y4D1 1078 aa20.09■□□□□ 0.81
PTCH1-227ENST00000553256 DNAH14Q0VDD8 3507 aa20.09■□□□□ 0.81
PTCH1-227ENST00000553256 CHRNB2P17787 502 aa20.08■□□□□ 0.81
PTCH1-227ENST00000553256 SLC6A4P31645 630 aa20.08■□□□□ 0.81
PTCH1-227ENST00000553256 SGSHP51688 502 aa20.08■□□□□ 0.81
PTCH1-227ENST00000553256 ADGRF1Q5T601 910 aa20.08■□□□□ 0.81
PTCH1-227ENST00000553256 OTUD1Q5VV17 481 aaPredicted RBP20.08■□□□□ 0.81
PTCH1-227ENST00000553256 HEATR6Q6AI08 1181 aaKnown RBP20.08■□□□□ 0.81
PTCH1-227ENST00000553256 FAM183BPQ6ZVS7 135 aa20.08■□□□□ 0.81
PTCH1-227ENST00000553256 KIAA0907Q7Z7F0 614 aaPredicted RBP20.08■□□□□ 0.81
PTCH1-227ENST00000553256 CCDC33Q8N5R6 958 aa20.08■□□□□ 0.81
PTCH1-227ENST00000553256 TXNDC5Q8NBS9 432 aaKnown RBP20.08■□□□□ 0.81
PTCH1-227ENST00000553256 ZNF397Q8NF99 534 aaPredicted RBP20.08■□□□□ 0.81
PTCH1-227ENST00000553256 OLIG1Q8TAK6 271 aa20.08■□□□□ 0.81
PTCH1-227ENST00000553256 LMLNQ96KR4 655 aa20.08■□□□□ 0.81
PTCH1-227ENST00000553256 XPO6Q96QU8 1125 aaKnown RBP20.08■□□□□ 0.81
PTCH1-227ENST00000553256 IRX2Q9BZI1 471 aaPredicted RBP20.08■□□□□ 0.81
PTCH1-227ENST00000553256 FAM207AQ9NSI2 230 aaPredicted RBP20.08■□□□□ 0.81
PTCH1-227ENST00000553256 CALCOCO1Q9P1Z2 691 aa20.08■□□□□ 0.81
PTCH1-227ENST00000553256 TLR6Q9Y2C9 796 aa20.08■□□□□ 0.81
PTCH1-227ENST00000553256 A0A1W2PQF6 199 aa20.07■□□□□ 0.8
PTCH1-227ENST00000553256 TBC1D3BA6NDS4 549 aa20.07■□□□□ 0.8
PTCH1-227ENST00000553256 PES1O00541 588 aaKnown RBP20.07■□□□□ 0.8
PTCH1-227ENST00000553256 IRAK2O43187 625 aa20.07■□□□□ 0.8
PTCH1-227ENST00000553256 TIE1P35590 1138 aa20.07■□□□□ 0.8
PTCH1-227ENST00000553256 HARS2P49590 506 aaKnown RBP20.07■□□□□ 0.8
PTCH1-227ENST00000553256 DGKGP49619 791 aa20.07■□□□□ 0.8
PTCH1-227ENST00000553256 TBX4P57082 545 aa20.07■□□□□ 0.8
PTCH1-227ENST00000553256 ENPP2Q13822 863 aa20.07■□□□□ 0.8
PTCH1-227ENST00000553256 GEN1Q17RS7 908 aa20.07■□□□□ 0.8
PTCH1-227ENST00000553256 C10orf76Q5T2E6 689 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms