RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 NFIL3Q16649 462 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 ZNF423Q2M1K9 1284 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 WDR45BQ5MNZ6 344 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 SYCP2LQ5T4T6 812 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 SPOPLQ6IQ16 392 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 TADA2BQ86TJ2 420 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 DNASE2BQ8WZ79 361 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 DHTKD1Q96HY7 919 aaPredicted RBP12.45□□□□□ -0.42
CKAP4-202ENST00000552828 CDK5RAP1Q96SZ6 601 aaKnown RBP12.45□□□□□ -0.42
CKAP4-202ENST00000552828 TSG101Q99816 390 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 NT5C1AQ9BXI3 368 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 NUP62CLQ9H1M0 184 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 APOBEC3GQ9HC16 384 aaKnown RBP12.45□□□□□ -0.42
CKAP4-202ENST00000552828 RAD54BQ9Y620 910 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 MYO18AQ92614 2054 aaKnown RBP12.45□□□□□ -0.42
CKAP4-202ENST00000552828 WASH3PC4AMC7 463 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 PSMA7O14818 248 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 MDM4O15151 490 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 NDUFS2O75306 463 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 CILPO75339 1184 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 NR2F2P24468 414 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 CD6P30203 668 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 MFAP3P55082 362 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 EDRF1Q3B7T1 1238 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 C10orf120Q5SQS8 335 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 FYB2Q5VWT5 728 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 CEP135Q66GS9 1140 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 CADM4Q8NFZ8 388 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 OR2I1PQ8NGU4 316 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 DUSP16Q9BY84 665 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 UBXN6Q9BZV1 441 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 ZDHHC5Q9C0B5 715 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 SLC6A17Q9H1V8 727 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 CD93Q9NPY3 652 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 ITM2CQ9NQX7 267 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 WSB2Q9NYS7 404 aaPredicted RBP12.44□□□□□ -0.42
CKAP4-202ENST00000552828 USP36Q9P275 1121 aaKnown RBP12.44□□□□□ -0.42
CKAP4-202ENST00000552828 THAP10Q9P2Z0 257 aaPredicted RBP12.44□□□□□ -0.42
CKAP4-202ENST00000552828 NAGPAQ9UK23 515 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 NUDT5Q9UKK9 219 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 STON1Q9Y6Q2 735 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 PI4KAP42356 2102 aa12.44□□□□□ -0.42
CKAP4-202ENST00000552828 CETN3O15182 167 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 SH3BP5O60239 455 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 MBD3O95983 291 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 IGLV3-19P01714 112 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 C7P10643 843 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 RALAP11233 206 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 GNSP15586 552 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 BMP6P22004 513 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 CHKAP35790 457 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 PIK3CAP42336 1068 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 VAMP7P51809 220 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 COG7P83436 770 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 STARD3Q14849 445 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 TRIP6Q15654 476 aaKnown RBP12.43□□□□□ -0.42
CKAP4-202ENST00000552828 PLEKHG6Q3KR16 790 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 FUT11Q495W5 492 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 ZCWPW2Q504Y3 356 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 INTS8Q75QN2 995 aaKnown RBP12.43□□□□□ -0.42
CKAP4-202ENST00000552828 RGL4Q8IZJ4 473 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 CHCHD4Q8N4Q1 142 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 RBBP8NLQ8NC74 664 aaPredicted RBP12.43□□□□□ -0.42
CKAP4-202ENST00000552828 GPT2Q8TD30 523 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 TAS1R2Q8TE23 839 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 ADAMTS14Q8WXS8 1223 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 TOE1Q96GM8 510 aaKnown RBP12.43□□□□□ -0.42
CKAP4-202ENST00000552828 FAXDC2Q96IV6 333 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 PIWIL1Q96J94 861 aaKnown RBP12.43□□□□□ -0.42
CKAP4-202ENST00000552828 IMPG2Q9BZV3 1241 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 DCLK3Q9C098 648 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 NIF3L1Q9GZT8 377 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 MKRN2Q9H000 416 aaKnown RBP12.43□□□□□ -0.42
CKAP4-202ENST00000552828 PRDM16Q9HAZ2 1276 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 PLK2Q9NYY3 685 aa12.43□□□□□ -0.42
CKAP4-202ENST00000552828 SMG1Q96Q15 3661 aaKnown RBP12.42□□□□□ -0.42
CKAP4-202ENST00000552828 A0A1B0GTW7 788 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 KCNJ18B7U540 433 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 PPP1R3GB7ZBB8 358 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 TAF4O00268 1085 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 CBFA2T3O75081 653 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 CD44P16070 742 aaKnown RBP12.42□□□□□ -0.42
CKAP4-202ENST00000552828 OXTRP30559 389 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 PSMC2P35998 433 aaKnown RBP12.42□□□□□ -0.42
CKAP4-202ENST00000552828 IL12RB1P42701 662 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 GCLMP48507 274 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 FKBP3Q00688 224 aaKnown RBP12.42□□□□□ -0.42
CKAP4-202ENST00000552828 LRRC63Q05C16 580 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 PPP3CAQ08209 521 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 GRIK2Q13002 908 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 E2F5Q15329 346 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 GEN1Q17RS7 908 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 RAB41Q5JT25 222 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 PPP1R26Q5T8A7 1209 aaPredicted RBP12.42□□□□□ -0.42
CKAP4-202ENST00000552828 ANKRD40Q6AI12 368 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 KLHL10Q6JEL2 608 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 LRSAM1Q6UWE0 723 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 KIAA1324Q6UXG2 1013 aaKnown RBP12.42□□□□□ -0.42
CKAP4-202ENST00000552828 GLRX5Q86SX6 157 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 FAM217AQ8IXS0 508 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms