RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 PPP1R37O75864 691 aa15.22■□□□□ 0.03
VPS29-209ENST00000551655 ZNF132P52740 706 aa15.22■□□□□ 0.03
VPS29-209ENST00000551655 POSTNQ15063 836 aa15.22■□□□□ 0.03
VPS29-209ENST00000551655 FYB2Q5VWT5 728 aa15.22■□□□□ 0.03
VPS29-209ENST00000551655 TMEM215Q68D42 235 aa15.22■□□□□ 0.03
VPS29-209ENST00000551655 SERPINA13PQ6UXR4 307 aa15.22■□□□□ 0.03
VPS29-209ENST00000551655 Q6ZNB5 142 aa15.22■□□□□ 0.03
VPS29-209ENST00000551655 PAQR9Q6ZVX9 377 aa15.22■□□□□ 0.03
VPS29-209ENST00000551655 ZNF720Q7Z2F6 126 aa15.22■□□□□ 0.03
VPS29-209ENST00000551655 KRI1Q8N9T8 703 aaKnown RBP15.22■□□□□ 0.03
VPS29-209ENST00000551655 BTBD1Q9H0C5 482 aa15.22■□□□□ 0.03
VPS29-209ENST00000551655 ST6GALNAC4Q9H4F1 302 aa15.22■□□□□ 0.03
VPS29-209ENST00000551655 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.22■□□□□ 0.03
VPS29-209ENST00000551655 INTS13Q9NVM9 706 aa15.22■□□□□ 0.03
VPS29-209ENST00000551655 ELOVL2Q9NXB9 296 aa15.22■□□□□ 0.03
VPS29-209ENST00000551655 MYO9AB2RTY4 2548 aa15.22■□□□□ 0.03
VPS29-209ENST00000551655 TEP1Q99973 2627 aaKnown RBP15.22■□□□□ 0.03
VPS29-209ENST00000551655 ARID1BQ8NFD5 2236 aaPredicted RBP15.21■□□□□ 0.03
VPS29-209ENST00000551655 FAM47DPA6NHR8 397 aa15.21■□□□□ 0.03
VPS29-209ENST00000551655 NTRK1P04629 796 aa15.21■□□□□ 0.03
VPS29-209ENST00000551655 EPHA8P29322 1005 aaPredicted RBP15.21■□□□□ 0.03
VPS29-209ENST00000551655 BCAT1P54687 386 aa15.21■□□□□ 0.03
VPS29-209ENST00000551655 FAM35AQ86V20 835 aa15.21■□□□□ 0.03
VPS29-209ENST00000551655 EXD3Q8N9H8 876 aa15.21■□□□□ 0.03
VPS29-209ENST00000551655 B3GALNT2Q8NCR0 500 aa15.21■□□□□ 0.03
VPS29-209ENST00000551655 UCMAQ8WVF2 138 aa15.21■□□□□ 0.03
VPS29-209ENST00000551655 RFFLQ8WZ73 363 aa15.21■□□□□ 0.03
VPS29-209ENST00000551655 ANKRD36BP1Q96IX9 119 aa15.21■□□□□ 0.03
VPS29-209ENST00000551655 PIWIL1Q96J94 861 aaKnown RBP15.21■□□□□ 0.03
VPS29-209ENST00000551655 IL37Q9NZH6 218 aa15.21■□□□□ 0.03
VPS29-209ENST00000551655 R3HCC1Q9Y3T6 440 aaKnown RBP15.21■□□□□ 0.03
VPS29-209ENST00000551655 HEMK1Q9Y5R4 338 aaPredicted RBP15.21■□□□□ 0.03
VPS29-209ENST00000551655 A8MXQ7 604 aa15.2■□□□□ 0.02
VPS29-209ENST00000551655 TERTO14746 1132 aaKnown RBP15.2■□□□□ 0.02
VPS29-209ENST00000551655 DFNA5O60443 496 aa15.2■□□□□ 0.02
VPS29-209ENST00000551655 BEST1O76090 585 aa15.2■□□□□ 0.02
VPS29-209ENST00000551655 MT-CO3P00414 261 aa15.2■□□□□ 0.02
VPS29-209ENST00000551655 PENKP01210 267 aaPredicted RBP15.2■□□□□ 0.02
VPS29-209ENST00000551655 KLKB1P03952 638 aa15.2■□□□□ 0.02
VPS29-209ENST00000551655 CASP5P51878 434 aa15.2■□□□□ 0.02
VPS29-209ENST00000551655 RPS14P62263 151 aaKnown RBP15.2■□□□□ 0.02
VPS29-209ENST00000551655 GABREP78334 506 aa15.2■□□□□ 0.02
VPS29-209ENST00000551655 CAMK2GQ13555 558 aaPredicted RBP15.2■□□□□ 0.02
VPS29-209ENST00000551655 DYMQ7RTS9 669 aa15.2■□□□□ 0.02
VPS29-209ENST00000551655 ANKS1BQ7Z6G8 1248 aa15.2■□□□□ 0.02
VPS29-209ENST00000551655 KCTD17Q8N5Z5 321 aa15.2■□□□□ 0.02
VPS29-209ENST00000551655 ZMIZ2Q8NF64 920 aa15.2■□□□□ 0.02
VPS29-209ENST00000551655 CYB5D2Q8WUJ1 264 aa15.2■□□□□ 0.02
VPS29-209ENST00000551655 RAD54LQ92698 747 aa15.2■□□□□ 0.02
VPS29-209ENST00000551655 ZNF578Q96N58 590 aaPredicted RBP15.2■□□□□ 0.02
VPS29-209ENST00000551655 MED10Q9BTT4 135 aa15.2■□□□□ 0.02
VPS29-209ENST00000551655 STRA6Q9BX79 667 aa15.2■□□□□ 0.02
VPS29-209ENST00000551655 FGFBP2Q9BYJ0 223 aa15.2■□□□□ 0.02
VPS29-209ENST00000551655 FAM117AQ9C073 453 aa15.2■□□□□ 0.02
VPS29-209ENST00000551655 ANKMY1Q9P2S6 941 aa15.2■□□□□ 0.02
VPS29-209ENST00000551655 FAM92AA1XBS5 289 aa15.19■□□□□ 0.02
VPS29-209ENST00000551655 NPC1O15118 1278 aa15.19■□□□□ 0.02
VPS29-209ENST00000551655 CST3P01034 146 aaPredicted RBP15.19■□□□□ 0.02
VPS29-209ENST00000551655 TNNC2P02585 160 aa15.19■□□□□ 0.02
VPS29-209ENST00000551655 CKMT2P17540 419 aa15.19■□□□□ 0.02
VPS29-209ENST00000551655 ABCD1P33897 745 aa15.19■□□□□ 0.02
VPS29-209ENST00000551655 RACK1P63244 317 aaKnown RBP15.19■□□□□ 0.02
VPS29-209ENST00000551655 KIAA0895LQ68EN5 471 aa15.19■□□□□ 0.02
VPS29-209ENST00000551655 GPRIN1Q7Z2K8 1008 aa15.19■□□□□ 0.02
VPS29-209ENST00000551655 SNRNP27Q8WVK2 155 aaKnown RBP15.19■□□□□ 0.02
VPS29-209ENST00000551655 NMUR1Q9HB89 426 aa15.19■□□□□ 0.02
VPS29-209ENST00000551655 DMAP1Q9NPF5 467 aaPredicted RBP15.19■□□□□ 0.02
VPS29-209ENST00000551655 AASDHPPTQ9NRN7 309 aa15.19■□□□□ 0.02
VPS29-209ENST00000551655 BSNQ9UPA5 3926 aa15.19■□□□□ 0.02
VPS29-209ENST00000551655 NBPF19A0A087WUL8 3843 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 RELNP78509 3460 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 A0A1W2PPC4 97 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 CYP26A1O43174 497 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 TACC1O75410 805 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 STC2O76061 302 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 MYF5P13349 255 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 ATP5C1P36542 298 aaKnown RBP15.18■□□□□ 0.02
VPS29-209ENST00000551655 ILKQ13418 452 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 L1TD1Q5T7N2 865 aaKnown RBP15.18■□□□□ 0.02
VPS29-209ENST00000551655 SFMBT2Q5VUG0 894 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 KANSL1Q7Z3B3 1105 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 ELMO3Q96BJ8 720 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 HVCN1Q96D96 273 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 VCPIP1Q96JH7 1222 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 ACCSQ96QU6 501 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 SMOQ99835 787 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 MTG2Q9H4K7 406 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 MRPL44Q9H9J2 332 aaKnown RBP15.18■□□□□ 0.02
VPS29-209ENST00000551655 ASCL3Q9NQ33 180 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 KRT82Q9NSB4 513 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 SERGEFQ9UGK8 458 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 ADAMTS1Q9UHI8 967 aa15.18■□□□□ 0.02
VPS29-209ENST00000551655 A0A1W2PR77 199 aa15.17■□□□□ 0.02
VPS29-209ENST00000551655 K7ENP7 123 aa15.17■□□□□ 0.02
VPS29-209ENST00000551655 SDC3O75056 442 aa15.17■□□□□ 0.02
VPS29-209ENST00000551655 AP1G2O75843 785 aa15.17■□□□□ 0.02
VPS29-209ENST00000551655 LDHAP00338 332 aaKnown RBP15.17■□□□□ 0.02
VPS29-209ENST00000551655 HMBSP08397 361 aa15.17■□□□□ 0.02
VPS29-209ENST00000551655 GARTP22102 1010 aa15.17■□□□□ 0.02
VPS29-209ENST00000551655 NEK4P51957 841 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms