RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 DDR2Q16832 855 aa12.57□□□□□ -0.4
NR4A1-215ENST00000550557 SDHAF4Q5VUM1 108 aa12.57□□□□□ -0.4
NR4A1-215ENST00000550557 FUT10Q6P4F1 479 aa12.57□□□□□ -0.4
NR4A1-215ENST00000550557 ZFP42Q96MM3 310 aa12.57□□□□□ -0.4
NR4A1-215ENST00000550557 CYTH2Q99418 400 aa12.57□□□□□ -0.4
NR4A1-215ENST00000550557 MORF4L1Q9UBU8 362 aa12.57□□□□□ -0.4
NR4A1-215ENST00000550557 ITM2BQ9Y287 266 aa12.57□□□□□ -0.4
NR4A1-215ENST00000550557 IRS2Q9Y4H2 1338 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 RNF225M0QZC1 329 aaPredicted RBP12.56□□□□□ -0.4
NR4A1-215ENST00000550557 CCL16O15467 120 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 ATP5HO75947 161 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 ADH1CP00326 375 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 PBLDP30039 288 aaPredicted RBP12.56□□□□□ -0.4
NR4A1-215ENST00000550557 PEX19P40855 299 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 TRIM4Q9C037 500 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 AASDHPPTQ9NRN7 309 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 SMIM28A0A1B0GU29 152 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 IGF2BP3O00425 579 aaKnown RBP eCLIP12.56□□□□□ -0.4
NR4A1-215ENST00000550557 DNAJC8O75937 253 aaPredicted RBP12.56□□□□□ -0.4
NR4A1-215ENST00000550557 EOMESO95936 686 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 POLR2LP62875 67 aaKnown RBP12.56□□□□□ -0.4
NR4A1-215ENST00000550557 SLC20A2Q08357 652 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 KCNA1Q09470 495 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 CCDC33Q8N5R6 958 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 MAB21L3Q8N8X9 362 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 MYCBPAPQ8TBZ2 947 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 HDAC7Q8WUI4 952 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 PRMT1Q99873 361 aaKnown RBP12.56□□□□□ -0.4
NR4A1-215ENST00000550557 ZNF112Q9UJU3 913 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 C10orf71Q711Q0 1435 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 FGFR1P11362 822 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 C1QBPQ07021 282 aaKnown RBP12.56□□□□□ -0.4
NR4A1-215ENST00000550557 NFIL3Q16649 462 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 CNKSR3Q6P9H4 555 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 CREG2Q8IUH2 290 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 LZTR1Q8N653 840 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 TLR10Q9BXR5 811 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 ECT2Q9H8V3 914 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 TMBIM4Q9HC24 238 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 NSMCE4AQ9NXX6 385 aa12.56□□□□□ -0.4
NR4A1-215ENST00000550557 MARF1Q9Y4F3 1742 aaKnown RBP12.55□□□□□ -0.4
NR4A1-215ENST00000550557 C1QTNF3-AMACRE9PGA6 284 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 EPHB6O15197 1021 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 CRTAMO95727 393 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 LMNAP02545 664 aaKnown RBP12.55□□□□□ -0.4
NR4A1-215ENST00000550557 GLI1P08151 1106 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 FDFT1P37268 417 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 VCPP55072 806 aaKnown RBP12.55□□□□□ -0.4
NR4A1-215ENST00000550557 SLC6A3Q01959 620 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 RARS2Q5T160 578 aaKnown RBP12.55□□□□□ -0.4
NR4A1-215ENST00000550557 ZNF618Q5T7W0 954 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 MFSD4BQ5TF39 518 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 IRAK1BP1Q5VVH5 260 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 PDCD7Q8N8D1 485 aaKnown RBP12.55□□□□□ -0.4
NR4A1-215ENST00000550557 C3orf20Q8ND61 904 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 MAML1Q92585 1016 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 CD274Q9NZQ7 290 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 TPX2Q9ULW0 747 aaKnown RBP12.55□□□□□ -0.4
NR4A1-215ENST00000550557 PSTPIP1O43586 416 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 PPP3CCP48454 512 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 ART3Q13508 389 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 LRRC14Q15048 493 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.55□□□□□ -0.4
NR4A1-215ENST00000550557 SNX31Q8N9S9 440 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 LPCAT1Q8NF37 534 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 ACTRT1Q8TDG2 376 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 LENG9Q96B70 501 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 TRAIPQ9BWF2 469 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 TMEM161AQ9NX61 479 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 IGKV6D-41A0A0C4DH26 115 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 IFRD1O00458 451 aaPredicted RBP12.55□□□□□ -0.4
NR4A1-215ENST00000550557 MAPK9P45984 424 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 BCL2L1Q07817 233 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 FOXD4Q12950 439 aaPredicted RBP12.55□□□□□ -0.4
NR4A1-215ENST00000550557 SPARCL1Q14515 664 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 ACOX1Q15067 660 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 ILDR2Q71H61 639 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 DDIASQ8IXT1 998 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 TEKT4Q8WW24 435 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 BAP1Q92560 729 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 ZCCHC2Q9C0B9 1178 aaKnown RBP12.55□□□□□ -0.4
NR4A1-215ENST00000550557 SLC40A1Q9NP59 571 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 UBA2Q9UBT2 640 aaPredicted RBP12.55□□□□□ -0.4
NR4A1-215ENST00000550557 GTF2IRD1Q9UHL9 959 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 SCOCQ9UIL1 159 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 LNPEPQ9UIQ6 1025 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 ANGPTL2Q9UKU9 493 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 REXO2Q9Y3B8 237 aaKnown RBP12.55□□□□□ -0.4
NR4A1-215ENST00000550557 MYH2Q9UKX2 1941 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 CRYBG1Q9Y4K1 1723 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 M0R2N6 131 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 TLR5O60602 858 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 HSPA9P38646 679 aaKnown RBP12.55□□□□□ -0.4
NR4A1-215ENST00000550557 ERMARDQ5T6L9 678 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 UGT3A1Q6NUS8 523 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 PRR23CQ6ZRP0 262 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 CPA6Q8N4T0 437 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 HSFY1Q96LI6 401 aa12.55□□□□□ -0.4
NR4A1-215ENST00000550557 NIFKQ9BYG3 293 aaKnown RBP12.55□□□□□ -0.4
NR4A1-215ENST00000550557 CLPBQ9H078 707 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms