RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 ASIC3Q9UHC3 531 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 FBXW11Q9UKB1 542 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 NAALADL1Q9UQQ1 740 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 R3HDM2Q9Y2K5 976 aaKnown RBP13.05□□□□□ -0.32
CACNB3-217ENST00000550483 CDY1Q9Y6F8 540 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 NLRC5Q86WI3 1866 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 PTPRDP23468 1912 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 HACD1B0YJ81 288 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 NT5C1B-RDH14C9J2C7 533 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 NCAM2O15394 837 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 CCR1P32246 355 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 ACTN2P35609 894 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 HSPA9P38646 679 aaKnown RBP13.04□□□□□ -0.32
CACNB3-217ENST00000550483 PPP3CCP48454 512 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 EIF3EP60228 445 aaKnown RBP13.04□□□□□ -0.32
CACNB3-217ENST00000550483 ROR1Q01973 937 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 NME3Q13232 169 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 PLD1Q13393 1074 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 SNX1Q13596 522 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 C9orf50Q5SZB4 431 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 SYPL2Q5VXT5 272 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 HFE2Q6ZVN8 426 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 TMEM173Q86WV6 379 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-217ENST00000550483 FAM131BQ86XD5 332 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 CDKL3Q8IVW4 592 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-217ENST00000550483 GOLGA6L1Q8N7Z2 621 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 ZNF461Q8TAF7 563 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 DQX1Q8TE96 717 aaKnown RBP13.04□□□□□ -0.32
CACNB3-217ENST00000550483 BCL7CQ8WUZ0 217 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-217ENST00000550483 RSAD2Q8WXG1 361 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 ATG4AQ8WYN0 398 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 ACSF2Q96CM8 615 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-217ENST00000550483 CSPG4P5Q96PW8 444 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 HAPLN3Q96S86 360 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 EPAS1Q99814 870 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 TRIM51Q9BSJ1 452 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 BRD8Q9H0E9 1235 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 OSBPL2Q9H1P3 480 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 WDR6Q9NNW5 1121 aaKnown RBP13.04□□□□□ -0.32
CACNB3-217ENST00000550483 MRPL17Q9NRX2 175 aaKnown RBP13.04□□□□□ -0.32
CACNB3-217ENST00000550483 PIGVQ9NUD9 493 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 DNPEPQ9ULA0 475 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 MRPL42Q9Y6G3 142 aaKnown RBP13.04□□□□□ -0.32
CACNB3-217ENST00000550483 MYO9BQ13459 2157 aa13.04□□□□□ -0.32
CACNB3-217ENST00000550483 TET1Q8NFU7 2136 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 ESYT3A0FGR9 886 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 ZBBXA8MT70 800 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 IRAK2O43187 625 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 ABLIM3O94929 683 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 SEC31AO94979 1220 aaKnown RBP13.03□□□□□ -0.32
CACNB3-217ENST00000550483 C1RP00736 705 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 KRT14P02533 472 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 CD48P09326 243 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 CSH1P0DML2 217 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 CSH2P0DML3 217 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 MYBL2P10244 700 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 TFE3P19532 575 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-217ENST00000550483 IL4RP24394 825 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 SERPINB6P35237 376 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 ADCY8P40145 1251 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 KCNJ1P48048 391 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 ARPP19P56211 112 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 NRG1Q02297 640 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-217ENST00000550483 EIF4EBP2Q13542 120 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-217ENST00000550483 RAB33AQ14088 237 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 VEPH1Q14D04 833 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 ZC3H12AQ5D1E8 599 aaKnown RBP13.03□□□□□ -0.32
CACNB3-217ENST00000550483 PPP6R3Q5H9R7 873 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-217ENST00000550483 CFAP58Q5T655 872 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 ANKS1BQ7Z6G8 1248 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 CROCCP2Q86T23 111 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 TAC4Q86UU9 113 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 CCDC185Q8N715 623 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 PLD5Q8N7P1 536 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 ATAD1Q8NBU5 361 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 HERVK_113Q902F9 699 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 NDRG1Q92597 394 aaKnown RBP13.03□□□□□ -0.32
CACNB3-217ENST00000550483 CLP1Q92989 425 aaKnown RBP13.03□□□□□ -0.32
CACNB3-217ENST00000550483 ART4Q93070 314 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 FBXO32Q969P5 355 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 PGLYRP2Q96PD5 576 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 SEPT5Q99719 369 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-217ENST00000550483 PHACTR1Q9C0D0 580 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 DPH5Q9H2P9 285 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 MED4Q9NPJ6 270 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 ARHGEF38Q9NXL2 777 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 OGFRQ9NZT2 677 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 HCSTQ9UBK5 93 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 SLC12A6Q9UHW9 1150 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 LZTS1Q9Y250 596 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 NEU2Q9Y3R4 380 aa13.03□□□□□ -0.32
CACNB3-217ENST00000550483 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.02□□□□□ -0.33
CACNB3-217ENST00000550483 BCLAF3A2AJT9 711 aaKnown RBP13.02□□□□□ -0.33
CACNB3-217ENST00000550483 WDR27A2RRH5 827 aa13.02□□□□□ -0.33
CACNB3-217ENST00000550483 ZSCAN5CA6NGD5 496 aaPredicted RBP13.02□□□□□ -0.33
CACNB3-217ENST00000550483 SGK1O00141 431 aa13.02□□□□□ -0.33
CACNB3-217ENST00000550483 EEF2KO00418 725 aaKnown RBP13.02□□□□□ -0.33
CACNB3-217ENST00000550483 ACRP10323 421 aa13.02□□□□□ -0.33
CACNB3-217ENST00000550483 RBP3P10745 1247 aa13.02□□□□□ -0.33
CACNB3-217ENST00000550483 KLRC2P26717 231 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms