RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 COL4A3Q01955 1670 aa13.59□□□□□ -0.23
RAB5C-206ENST00000550406 SYNJ2BP-COX16A0A087WUM0 186 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 E2F8A0AVK6 867 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 ARNTLO00327 626 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 CCP110O43303 1012 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 NARSO43776 548 aaKnown RBP13.58□□□□□ -0.24
RAB5C-206ENST00000550406 PSMC3P17980 439 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 CXCR3P49682 368 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 ZNF143P52747 638 aaPredicted RBP13.58□□□□□ -0.24
RAB5C-206ENST00000550406 TBX4P57082 545 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 ATP11AP98196 1134 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 NNTQ13423 1086 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 ZC3H12AQ5D1E8 599 aaKnown RBP13.58□□□□□ -0.24
RAB5C-206ENST00000550406 DCUN1D2Q6PH85 259 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 GJD3Q8N144 294 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 TTC16Q8NEE8 873 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 PLD4Q96BZ4 506 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 P2RY11Q96G91 374 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 ZNF830Q96NB3 372 aaPredicted RBP13.58□□□□□ -0.24
RAB5C-206ENST00000550406 DESI2Q9BSY9 194 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 DDIT4Q9NX09 232 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 RRN3Q9NYV6 651 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 COX16Q9P0S2 106 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 XPO7Q9UIA9 1087 aaKnown RBP13.58□□□□□ -0.24
RAB5C-206ENST00000550406 STAP1Q9ULZ2 295 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 TLR6Q9Y2C9 796 aa13.58□□□□□ -0.24
RAB5C-206ENST00000550406 KCNU1A8MYU2 1149 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 ARSAP15289 507 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 GDI1P31150 447 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 SDC4P31431 198 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 GBP1P32455 592 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 HDAC4P56524 1084 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 RING1Q06587 406 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 NME3Q13232 169 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 TDGQ13569 410 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 TCEAL1Q15170 157 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 SPA17Q15506 151 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 CDO1Q16878 200 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 EML3Q32P44 896 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 ARTNQ5T4W7 220 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 IER5LQ5T953 404 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 TRIM68Q6AZZ1 485 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 DDX42Q86XP3 938 aaKnown RBP eCLIP13.57□□□□□ -0.24
RAB5C-206ENST00000550406 CPNE8Q86YQ8 564 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 DENND1CQ8IV53 801 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 BBS7Q8IWZ6 715 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 KIAA1958Q8N8K9 716 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 CCDC112Q8NEF3 446 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 SLC35G2Q8TBE7 412 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 DEPDC1BQ8WUY9 529 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 OSCP1Q8WVF1 389 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 CTNNBL1Q8WYA6 563 aaPredicted RBP13.57□□□□□ -0.24
RAB5C-206ENST00000550406 ANP32BQ92688 251 aaKnown RBP13.57□□□□□ -0.24
RAB5C-206ENST00000550406 SERPINB11Q96P15 392 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 TRMT61BQ9BVS5 477 aaKnown RBP13.57□□□□□ -0.24
RAB5C-206ENST00000550406 LACRTQ9GZZ8 138 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 FAM204AQ9H8W3 233 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 MRPL47Q9HD33 250 aaKnown RBP13.57□□□□□ -0.24
RAB5C-206ENST00000550406 OSGEPQ9NPF4 335 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 HPS4Q9NQG7 708 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 TMPRSS4Q9NRS4 437 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 SALL4Q9UJQ4 1053 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 AGO1Q9UL18 857 aaKnown RBP13.57□□□□□ -0.24
RAB5C-206ENST00000550406 SH3BP1Q9Y3L3 701 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 WNT6Q9Y6F9 365 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 SCINQ9Y6U3 715 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 DOCK4Q8N1I0 1966 aa13.57□□□□□ -0.24
RAB5C-206ENST00000550406 OTOL1A6NHN0 477 aaPredicted RBP13.56□□□□□ -0.24
RAB5C-206ENST00000550406 CHADO15335 359 aa13.56□□□□□ -0.24
RAB5C-206ENST00000550406 PJA2O43164 708 aa13.56□□□□□ -0.24
RAB5C-206ENST00000550406 ARHGAP6O43182 974 aa13.56□□□□□ -0.24
RAB5C-206ENST00000550406 MTA2O94776 668 aa13.56□□□□□ -0.24
RAB5C-206ENST00000550406 CORO1AP31146 461 aaKnown RBP13.56□□□□□ -0.24
RAB5C-206ENST00000550406 KPNA1P52294 538 aaPredicted RBP13.56□□□□□ -0.24
RAB5C-206ENST00000550406 DEUP1Q05D60 604 aa13.56□□□□□ -0.24
RAB5C-206ENST00000550406 TNK2Q07912 1038 aa13.56□□□□□ -0.24
RAB5C-206ENST00000550406 DAB2IPQ5VWQ8 1189 aa13.56□□□□□ -0.24
RAB5C-206ENST00000550406 NADSYN1Q6IA69 706 aa13.56□□□□□ -0.24
RAB5C-206ENST00000550406 STRADAQ7RTN6 431 aa13.56□□□□□ -0.24
RAB5C-206ENST00000550406 ADGRG2Q8IZP9 1017 aa13.56□□□□□ -0.24
RAB5C-206ENST00000550406 ZNF564Q8TBZ8 553 aaPredicted RBP13.56□□□□□ -0.24
RAB5C-206ENST00000550406 FNIP1Q8TF40 1166 aa13.56□□□□□ -0.24
RAB5C-206ENST00000550406 FAM172AQ8WUF8 416 aa13.56□□□□□ -0.24
RAB5C-206ENST00000550406 CNPY3Q9BT09 278 aa13.56□□□□□ -0.24
RAB5C-206ENST00000550406 MAGEB5Q9BZ81 275 aa13.56□□□□□ -0.24
RAB5C-206ENST00000550406 ARHGEF38Q9NXL2 777 aa13.56□□□□□ -0.24
RAB5C-206ENST00000550406 CTTNBP2NLQ9P2B4 639 aa13.56□□□□□ -0.24
RAB5C-206ENST00000550406 UVRAGQ9P2Y5 699 aa13.56□□□□□ -0.24
RAB5C-206ENST00000550406 ADGRG1Q9Y653 693 aa13.56□□□□□ -0.24
RAB5C-206ENST00000550406 DUSP10Q9Y6W6 482 aa13.56□□□□□ -0.24
RAB5C-206ENST00000550406 GOLGA6L7A0A1B0GV03 622 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 GFRA2O00451 464 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 F9P00740 461 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 TCF4P15884 667 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 PSMA2P25787 234 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 SLC6A4P31645 630 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 VAV2P52735 878 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 CCDC173Q0VFZ6 552 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 PPP2R5DQ14738 602 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 GAB4Q2WGN9 574 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms