RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 POLNQ7Z5Q5 900 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 TAC4Q86UU9 113 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 MAP7D3Q8IWC1 876 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 NPAS3Q8IXF0 933 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 TPCN2Q8NHX9 752 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 JOSD2Q8TAC2 188 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 FAM172AQ8WUF8 416 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 TEKT4Q8WW24 435 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 PPM1EQ8WY54 764 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 KHSRPQ92945 711 aaKnown RBP eCLIP10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 EXOC4Q96A65 974 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 PIWIL1Q96J94 861 aaKnown RBP10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 BTN2A3PQ96KV6 586 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 CFAP57Q96MR6 1250 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 ASB16Q96NS5 453 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 DCBLD2Q96PD2 775 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 HAPLN3Q96S86 360 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 CCSER2Q9H7U1 834 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 PRDM16Q9HAZ2 1276 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 ZFP14Q9HCL3 533 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 DDX56Q9NY93 547 aaKnown RBP10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 EPS15L1Q9UBC2 864 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 GUCA1BQ9UMX6 200 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 NAALADL1Q9UQQ1 740 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 SZT2Q5T011 3432 aa10.16□□□□□ -0.78
SMARCD1-206ENST00000549274 MACROD2A1Z1Q3 448 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 CCDC66A2RUB6 948 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 H3BQ06 376 aaPredicted RBP10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 MDM4O15151 490 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 PSTPIP1O43586 416 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 MOSPD3O75425 235 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 ECI2O75521 394 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 IGLV3-27P01718 113 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 FYNP06241 537 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 CCR2P41597 374 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 CXCR3P49682 368 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 NTHL1P78549 312 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 ATP11AP98196 1134 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 SCAPQ12770 1279 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 USP4Q13107 963 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 NME3Q13232 169 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 MESDQ14696 234 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 TAF5Q15542 800 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 CDO1Q16878 200 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 TTC39BQ5VTQ0 682 aaPredicted RBP10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 SYPL2Q5VXT5 272 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 PTCRAQ6ISU1 281 aaPredicted RBP10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 CC2D1AQ6P1N0 951 aaPredicted RBP10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 BNIPLQ7Z465 357 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 VSIG1Q86XK7 387 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 MIB1Q86YT6 1006 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 ARID3BQ8IVW6 561 aaPredicted RBP10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 RHOT1Q8IXI2 618 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 YAF2Q8IY57 180 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 ZDHHC14Q8IZN3 488 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 CCAR2Q8N163 923 aaKnown RBP10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 EMC1Q8N766 993 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 UBL4BQ8N7F7 174 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 ARL14EPQ8N8R7 260 aaPredicted RBP10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 ITFG1Q8TB96 612 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 ZSCAN18Q8TBC5 510 aaPredicted RBP10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 ATXN2LQ8WWM7 1075 aaKnown RBP10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 NDRG1Q92597 394 aaKnown RBP10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 ELSPBP1Q96BH3 223 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 TCEAL4Q96EI5 215 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 ZNF830Q96NB3 372 aaPredicted RBP10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 APOL5Q9BWW9 433 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 KLF16Q9BXK1 252 aaPredicted RBP10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 SLC46A2Q9BY10 475 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 LACRTQ9GZZ8 138 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 POMKQ9H5K3 350 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 OSGEPQ9NPF4 335 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 LZTFL1Q9NQ48 299 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 OSER1Q9NX31 292 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 IGSF9Q9P2J2 1179 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 AMFRQ9UKV5 643 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 ARIH1Q9Y4X5 557 aaPredicted RBP10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 CPQQ9Y646 472 aa10.15□□□□□ -0.78
SMARCD1-206ENST00000549274 C2orf78A6NCI8 922 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 GRXCR2A6NFK2 248 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 ZNF487B1APH4 448 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 LEFTY2O00292 366 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 BUB1BO60566 1050 aaPredicted RBP10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 LRCH4O75427 683 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 STC2O76061 302 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 LAMP2P13473 410 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 SSR1P43307 286 aaKnown RBP10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 EIF4EBP2Q13542 120 aaPredicted RBP10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 PDGFRLQ15198 375 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 CLUL1Q15846 466 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 PREPLQ4J6C6 727 aaPredicted RBP10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 SCYL2Q6P3W7 929 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 LRRC31Q6UY01 552 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 HTR3DQ70Z44 454 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 PEX26Q7Z412 305 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 SLFN11Q7Z7L1 901 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 PHLDB2Q86SQ0 1253 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 CCDC117Q8IWD4 279 aaPredicted RBP10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 BPIFB1Q8TDL5 484 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 SH3RF2Q8TEC5 729 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms