RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-208ENST00000549205 KPNA1P52294 538 aaPredicted RBP12.71□□□□□ -0.37
ERBB3-208ENST00000549205 AIF1P55008 147 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 TBX4P57082 545 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 NTHL1P78549 312 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 SCAPQ12770 1279 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 PPP2R5DQ14738 602 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 SMTNL2Q2TAL5 461 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 ATP13A4Q4VNC1 1196 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 ZC3H12AQ5D1E8 599 aaKnown RBP12.71□□□□□ -0.37
ERBB3-208ENST00000549205 KCNT1Q5JUK3 1230 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 PRSS36Q5K4E3 855 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 BRMS1LQ5PSV4 323 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 RARS2Q5T160 578 aaKnown RBP12.71□□□□□ -0.37
ERBB3-208ENST00000549205 ERMARDQ5T6L9 678 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 GRASPQ7Z6J2 395 aaPredicted RBP12.71□□□□□ -0.37
ERBB3-208ENST00000549205 MIB1Q86YT6 1006 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 PSTKQ8IV42 348 aaKnown RBP12.71□□□□□ -0.37
ERBB3-208ENST00000549205 CCDC185Q8N715 623 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 EXD1Q8NHP7 514 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 RNF34Q969K3 372 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 ACSF2Q96CM8 615 aaPredicted RBP12.71□□□□□ -0.37
ERBB3-208ENST00000549205 TCEAL4Q96EI5 215 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 SLC39A13Q96H72 371 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 PBKQ96KB5 322 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 SNRNP25Q9BV90 132 aaKnown RBP12.71□□□□□ -0.37
ERBB3-208ENST00000549205 NACA2Q9H009 215 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 RNF38Q9H0F5 515 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 ATXN3LQ9H3M9 355 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 PIDD1Q9HB75 910 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 TRPC7Q9HCX4 862 aa12.71□□□□□ -0.37
ERBB3-208ENST00000549205 XIRP2A4UGR9 3374 aa12.71□□□□□ -0.38
ERBB3-208ENST00000549205 SLC12A8A0AV02 714 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 SOBPA7XYQ1 873 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 ZNF197O14709 1029 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 MOSPD3O75425 235 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 URI1O94763 535 aaPredicted RBP12.7□□□□□ -0.38
ERBB3-208ENST00000549205 IGLV3-27P01718 113 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 KRT1P04264 644 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 SLC2A3P11169 496 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 HOXB8P17481 243 aaPredicted RBP12.7□□□□□ -0.38
ERBB3-208ENST00000549205 DDX6P26196 483 aaKnown RBP eCLIP12.7□□□□□ -0.38
ERBB3-208ENST00000549205 RING1Q06587 406 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 TUBB2AQ13885 445 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 COL19A1Q14993 1142 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 SLC5A9Q2M3M2 681 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 CTC1Q2NKJ3 1217 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 ARL13BQ3SXY8 428 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 TXNDC8Q6A555 127 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 SYCE2Q6PIF2 218 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 GPR149Q86SP6 731 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 RCOR2Q8IZ40 523 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 COG1Q8WTW3 980 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 HSPH1Q92598 858 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 RBM41Q96IZ5 413 aaKnown RBP12.7□□□□□ -0.38
ERBB3-208ENST00000549205 FCRL2Q96LA5 508 aaPredicted RBP12.7□□□□□ -0.38
ERBB3-208ENST00000549205 SLC22A12Q96S37 553 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 GAS2L1Q99501 681 aaPredicted RBP12.7□□□□□ -0.38
ERBB3-208ENST00000549205 TUBB2BQ9BVA1 445 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 TKTL2Q9H0I9 626 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 WDCPQ9H6R7 721 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.7□□□□□ -0.38
ERBB3-208ENST00000549205 KLHL11Q9NVR0 708 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.7□□□□□ -0.38
ERBB3-208ENST00000549205 GPATCH2LQ9NWQ4 482 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 ARHGEF38Q9NXL2 777 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 FZD10Q9ULW2 581 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 AP4E1Q9UPM8 1137 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 CHD5Q8TDI0 1954 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 SHROOM3Q8TF72 1996 aa12.7□□□□□ -0.38
ERBB3-208ENST00000549205 CLUHO75153 1309 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 TRAV19A0A0A6YYK7 116 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 LRRD1A4D1F6 860 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 KCNU1A8MYU2 1149 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 PI4K2BG5E9Z4 385 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 I6L893 689 aaPredicted RBP12.69□□□□□ -0.38
ERBB3-208ENST00000549205 SRGAP2O75044 1071 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 ZRANB2O95218 330 aaKnown RBP eCLIP12.69□□□□□ -0.38
ERBB3-208ENST00000549205 PYGMP11217 842 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 MBL2P11226 248 aaPredicted RBP12.69□□□□□ -0.38
ERBB3-208ENST00000549205 GJA1P17302 382 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 HDCP19113 662 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 IGFBP4P22692 258 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 ARSEP51690 589 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 COPS2P61201 443 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 COG7P83436 770 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 ZNF211Q13398 564 aaPredicted RBP12.69□□□□□ -0.38
ERBB3-208ENST00000549205 PDK2Q15119 407 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 TEAD2Q15562 447 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 DPYSL2Q16555 572 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 CA9Q16790 459 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 ARHGAP15Q53QZ3 475 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 EFHC2Q5JST6 749 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 ZFYVE27Q5T4F4 411 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 STXBP5Q5T5C0 1151 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 SEL1L2Q5TEA6 688 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 GPR153Q6NV75 609 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 ARL14EPQ8N8R7 260 aaPredicted RBP12.69□□□□□ -0.38
ERBB3-208ENST00000549205 MAB21L3Q8N8X9 362 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 FAM71BQ8TC56 605 aa12.69□□□□□ -0.38
ERBB3-208ENST00000549205 RAPGEF5Q92565 580 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms