RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 YWHAEP62258 255 aaKnown RBP18.21■□□□□ 0.51
CHMP1A-205ENST00000548650 NUCB2P80303 420 aa18.21■□□□□ 0.51
CHMP1A-205ENST00000548650 LMAN2Q12907 356 aa18.21■□□□□ 0.51
CHMP1A-205ENST00000548650 LRMPQ12912 555 aa18.21■□□□□ 0.51
CHMP1A-205ENST00000548650 PKDCCQ504Y2 493 aa18.21■□□□□ 0.51
CHMP1A-205ENST00000548650 SLC23A3Q6PIS1 610 aa18.21■□□□□ 0.51
CHMP1A-205ENST00000548650 CPXM2Q8N436 756 aa18.21■□□□□ 0.51
CHMP1A-205ENST00000548650 PIWIL1Q96J94 861 aaKnown RBP18.21■□□□□ 0.51
CHMP1A-205ENST00000548650 MRGPRX1Q96LB2 322 aa18.21■□□□□ 0.51
CHMP1A-205ENST00000548650 LRRC4Q9HBW1 653 aa18.21■□□□□ 0.51
CHMP1A-205ENST00000548650 HESX1Q9UBX0 185 aa18.21■□□□□ 0.51
CHMP1A-205ENST00000548650 CLEC4EQ9ULY5 219 aa18.21■□□□□ 0.51
CHMP1A-205ENST00000548650 CYP8B1Q9UNU6 501 aa18.21■□□□□ 0.51
CHMP1A-205ENST00000548650 STON1Q9Y6Q2 735 aa18.21■□□□□ 0.51
CHMP1A-205ENST00000548650 WASH3PC4AMC7 463 aa18.2■□□□□ 0.5
CHMP1A-205ENST00000548650 ZNF217O75362 1048 aa18.2■□□□□ 0.5
CHMP1A-205ENST00000548650 SETSIPP0DME0 302 aa18.2■□□□□ 0.5
CHMP1A-205ENST00000548650 ENGP17813 658 aa18.2■□□□□ 0.5
CHMP1A-205ENST00000548650 ENPP2Q13822 863 aa18.2■□□□□ 0.5
CHMP1A-205ENST00000548650 BECN1Q14457 450 aa18.2■□□□□ 0.5
CHMP1A-205ENST00000548650 TRIP4Q15650 581 aaPredicted RBP18.2■□□□□ 0.5
CHMP1A-205ENST00000548650 SH3PXD2AQ5TCZ1 1133 aa18.2■□□□□ 0.5
CHMP1A-205ENST00000548650 ANKS1BQ7Z6G8 1248 aa18.2■□□□□ 0.5
CHMP1A-205ENST00000548650 SLC41A1Q8IVJ1 513 aa18.2■□□□□ 0.5
CHMP1A-205ENST00000548650 DEFB119Q8N690 84 aa18.2■□□□□ 0.5
CHMP1A-205ENST00000548650 RBBP8NLQ8NC74 664 aaPredicted RBP18.2■□□□□ 0.5
CHMP1A-205ENST00000548650 TFAP2BQ92481 460 aa18.2■□□□□ 0.5
CHMP1A-205ENST00000548650 CEP63Q96MT8 703 aa18.2■□□□□ 0.5
CHMP1A-205ENST00000548650 NUSAP1Q9BXS6 441 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-205ENST00000548650 METTL14Q9HCE5 456 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-205ENST00000548650 OLA1Q9NTK5 396 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-205ENST00000548650 HOOK1Q9UJC3 728 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-205ENST00000548650 MAN1B1Q9UKM7 699 aa18.2■□□□□ 0.5
CHMP1A-205ENST00000548650 YJEFN3A6XGL0 299 aa18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 E7ENQ6 273 aa18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 PMM2O15305 246 aa18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 VDRP11473 427 aa18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 CSRP1P21291 193 aaKnown RBP18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 IL12RB1P42701 662 aa18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 ZNF33AQ06730 810 aa18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 ZNF252P-AS1Q0IIN9 211 aa18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 STIM1Q13586 685 aa18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 FUT11Q495W5 492 aa18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 ISM2Q6H9L7 571 aa18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 TTI2Q6NXR4 508 aa18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 FMNL3Q8IVF7 1028 aa18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 ELOA2Q8IYF1 753 aaPredicted RBP18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 UBA3Q8TBC4 463 aa18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 KCTD13Q8WZ19 329 aa18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 DHTKD1Q96HY7 919 aaPredicted RBP18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 HSPA12BQ96MM6 686 aa18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 IPO9Q96P70 1041 aaKnown RBP18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 ZSWIM1Q9BR11 485 aa18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 CAPN10Q9HC96 672 aa18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 THAP10Q9P2Z0 257 aaPredicted RBP18.19■□□□□ 0.5
CHMP1A-205ENST00000548650 NPC1O15118 1278 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 ZBTB24O43167 697 aaPredicted RBP18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 GABBR2O75899 941 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 CYBBP04839 570 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 CFIP05156 583 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 PAEPP09466 180 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 BMP6P22004 513 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 HOXD9P28356 352 aaPredicted RBP18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 MAPK8P45983 427 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 DAOAP59103 153 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 EIF4HQ15056 248 aaKnown RBP18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 ST3GAL2Q16842 350 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 UAP1L1Q3KQV9 507 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 BSPRYQ5W0U4 402 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 TMEM270Q6UE05 265 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 LCLAT1Q6UWP7 414 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 KIAA1324Q6UXG2 1013 aaKnown RBP18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 SIX6OS1Q8N1H7 587 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 SCML4Q8N228 414 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 EDEM1Q92611 657 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 KAT5Q92993 513 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 NT5C1BQ96P26 610 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 FSCN3Q9NQT6 498 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 CNGB3Q9NQW8 809 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 STOML2Q9UJZ1 356 aa18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 HBS1LQ9Y450 684 aaKnown RBP18.18■□□□□ 0.5
CHMP1A-205ENST00000548650 MSI1O43347 362 aaKnown RBP18.17■□□□□ 0.5
CHMP1A-205ENST00000548650 PPP1R2P41236 205 aa18.17■□□□□ 0.5
CHMP1A-205ENST00000548650 STARD3Q14849 445 aa18.17■□□□□ 0.5
CHMP1A-205ENST00000548650 DUOXA1Q1HG43 343 aa18.17■□□□□ 0.5
CHMP1A-205ENST00000548650 CCDC40Q4G0X9 1142 aa18.17■□□□□ 0.5
CHMP1A-205ENST00000548650 TMEM215Q68D42 235 aa18.17■□□□□ 0.5
CHMP1A-205ENST00000548650 KLHL10Q6JEL2 608 aa18.17■□□□□ 0.5
CHMP1A-205ENST00000548650 FOXR2Q6PJQ5 311 aa18.17■□□□□ 0.5
CHMP1A-205ENST00000548650 TRIML1Q8N9V2 468 aa18.17■□□□□ 0.5
CHMP1A-205ENST00000548650 LMO3Q8TAP4 145 aa18.17■□□□□ 0.5
CHMP1A-205ENST00000548650 CEP76Q8TAP6 659 aa18.17■□□□□ 0.5
CHMP1A-205ENST00000548650 DDI1Q8WTU0 396 aa18.17■□□□□ 0.5
CHMP1A-205ENST00000548650 SLC2A11Q9BYW1 496 aa18.17■□□□□ 0.5
CHMP1A-205ENST00000548650 MKRN2Q9H000 416 aaKnown RBP18.17■□□□□ 0.5
CHMP1A-205ENST00000548650 USP36Q9P275 1121 aaKnown RBP18.17■□□□□ 0.5
CHMP1A-205ENST00000548650 SFMBT1Q9UHJ3 866 aa18.17■□□□□ 0.5
CHMP1A-205ENST00000548650 KIAA1257Q9ULG3 409 aa18.17■□□□□ 0.5
CHMP1A-205ENST00000548650 FRYQ5TBA9 3013 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms