RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 GSDMAQ96QA5 445 aa14.83□□□□□ -0.04
PTCH1-217ENST00000548420 MTMR12Q9C0I1 747 aa14.83□□□□□ -0.04
PTCH1-217ENST00000548420 RAD54BQ9Y620 910 aa14.83□□□□□ -0.04
PTCH1-217ENST00000548420 BLACEA4D250 179 aa14.82□□□□□ -0.04
PTCH1-217ENST00000548420 EXOC3O60645 756 aa14.82□□□□□ -0.04
PTCH1-217ENST00000548420 GADD45BO75293 160 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-217ENST00000548420 PRPF40AO75400 957 aaKnown RBP14.82□□□□□ -0.04
PTCH1-217ENST00000548420 TMEM191BP0C7N4 346 aa14.82□□□□□ -0.04
PTCH1-217ENST00000548420 NTSR1P30989 418 aa14.82□□□□□ -0.04
PTCH1-217ENST00000548420 ANP32AP39687 249 aaKnown RBP14.82□□□□□ -0.04
PTCH1-217ENST00000548420 TLE1Q04724 770 aa14.82□□□□□ -0.04
PTCH1-217ENST00000548420 EGFLAMQ63HQ2 1017 aa14.82□□□□□ -0.04
PTCH1-217ENST00000548420 WSCD1Q658N2 575 aa14.82□□□□□ -0.04
PTCH1-217ENST00000548420 TRAPPC11Q7Z392 1133 aa14.82□□□□□ -0.04
PTCH1-217ENST00000548420 PLEKHO2Q8TD55 490 aa14.82□□□□□ -0.04
PTCH1-217ENST00000548420 PARD3BQ8TEW8 1205 aa14.82□□□□□ -0.04
PTCH1-217ENST00000548420 CGRRF1Q99675 332 aa14.82□□□□□ -0.04
PTCH1-217ENST00000548420 TMLHEQ9NVH6 421 aa14.82□□□□□ -0.04
PTCH1-217ENST00000548420 ARHGAP26Q9UNA1 814 aa14.82□□□□□ -0.04
PTCH1-217ENST00000548420 PCDHA5Q9Y5H7 936 aa14.82□□□□□ -0.04
PTCH1-217ENST00000548420 ARID1BQ8NFD5 2236 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-217ENST00000548420 TBC1D3BA6NDS4 549 aa14.81□□□□□ -0.04
PTCH1-217ENST00000548420 LEFTY2O00292 366 aa14.81□□□□□ -0.04
PTCH1-217ENST00000548420 MAPK13O15264 365 aa14.81□□□□□ -0.04
PTCH1-217ENST00000548420 CST3P01034 146 aaPredicted RBP14.81□□□□□ -0.04
PTCH1-217ENST00000548420 TNNC2P02585 160 aa14.81□□□□□ -0.04
PTCH1-217ENST00000548420 NR3C1P04150 777 aa14.81□□□□□ -0.04
PTCH1-217ENST00000548420 ZCWPW2Q504Y3 356 aa14.81□□□□□ -0.04
PTCH1-217ENST00000548420 GATAD2AQ86YP4 633 aa14.81□□□□□ -0.04
PTCH1-217ENST00000548420 CADM4Q8NFZ8 388 aa14.81□□□□□ -0.04
PTCH1-217ENST00000548420 KCNE4Q8WWG9 221 aa14.81□□□□□ -0.04
PTCH1-217ENST00000548420 RMND1Q9NWS8 449 aa14.81□□□□□ -0.04
PTCH1-217ENST00000548420 ABI2Q9NYB9 513 aaPredicted RBP14.81□□□□□ -0.04
PTCH1-217ENST00000548420 ANKRD6Q9Y2G4 727 aa14.81□□□□□ -0.04
PTCH1-217ENST00000548420 CENPEQ02224 2701 aa14.81□□□□□ -0.04
PTCH1-217ENST00000548420 E2F8A0AVK6 867 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 GABRDO14764 452 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 PAPSS1O43252 624 aaPredicted RBP14.8□□□□□ -0.04
PTCH1-217ENST00000548420 CALUO43852 315 aaPredicted RBP14.8□□□□□ -0.04
PTCH1-217ENST00000548420 STAU1O95793 577 aaKnown RBP14.8□□□□□ -0.04
PTCH1-217ENST00000548420 C1SP09871 688 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 CSH1P0DML2 217 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 CSH2P0DML3 217 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 DLATP10515 647 aaKnown RBP14.8□□□□□ -0.04
PTCH1-217ENST00000548420 HDCP19113 662 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 TNNI1P19237 187 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 GLDCP23378 1020 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 CASP4P49662 377 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 CCT8P50990 548 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 ENPEPQ07075 957 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 ZNF658Q5TYW1 1059 aaPredicted RBP14.8□□□□□ -0.04
PTCH1-217ENST00000548420 KIAA1324Q6UXG2 1013 aaKnown RBP14.8□□□□□ -0.04
PTCH1-217ENST00000548420 CLEC17AQ6ZS10 378 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 DPH6Q7L8W6 267 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 METTL23Q86XA0 190 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 ETFBKMTQ8IXQ9 262 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 TMEM86AQ8N2M4 240 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 PDCL2Q8N4E4 241 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 TOP6BLQ8N6T0 577 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 NAT16Q8N8M0 369 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 TMC2Q8TDI7 906 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 KCNV2Q8TDN2 545 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 IGSF8Q969P0 613 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 CCDC127Q96BQ5 260 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 LIN37Q96GY3 246 aaPredicted RBP14.8□□□□□ -0.04
PTCH1-217ENST00000548420 CNDP2Q96KP4 475 aaKnown RBP14.8□□□□□ -0.04
PTCH1-217ENST00000548420 MYRFLQ96LU7 910 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 ZNF578Q96N58 590 aaPredicted RBP14.8□□□□□ -0.04
PTCH1-217ENST00000548420 L1RE1Q9UN81 338 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 MAPK8IP1Q9UQF2 711 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 PCDHB1Q9Y5F3 818 aa14.8□□□□□ -0.04
PTCH1-217ENST00000548420 SETD2Q9BYW2 2564 aaPredicted RBP14.8□□□□□ -0.04
PTCH1-217ENST00000548420 NOL4O94818 638 aa14.79□□□□□ -0.04
PTCH1-217ENST00000548420 SMC2O95347 1197 aa14.79□□□□□ -0.04
PTCH1-217ENST00000548420 LDOC1O95751 146 aaPredicted RBP14.79□□□□□ -0.04
PTCH1-217ENST00000548420 C4BPAP04003 597 aaKnown RBP14.79□□□□□ -0.04
PTCH1-217ENST00000548420 KRT19P08727 400 aa14.79□□□□□ -0.04
PTCH1-217ENST00000548420 FAM163BP0C2L3 166 aa14.79□□□□□ -0.04
PTCH1-217ENST00000548420 PRCPP42785 496 aa14.79□□□□□ -0.04
PTCH1-217ENST00000548420 AP3M2P53677 418 aa14.79□□□□□ -0.04
PTCH1-217ENST00000548420 SMARCB1Q12824 385 aa14.79□□□□□ -0.04
PTCH1-217ENST00000548420 TP53BP1Q12888 1972 aaPredicted RBP14.79□□□□□ -0.04
PTCH1-217ENST00000548420 DDR2Q16832 855 aa14.79□□□□□ -0.04
PTCH1-217ENST00000548420 SOWAHAQ2M3V2 549 aa14.79□□□□□ -0.04
PTCH1-217ENST00000548420 EDRF1Q3B7T1 1238 aa14.79□□□□□ -0.04
PTCH1-217ENST00000548420 PRAMEF14Q5SWL7 426 aa14.79□□□□□ -0.04
PTCH1-217ENST00000548420 C10orf76Q5T2E6 689 aa14.79□□□□□ -0.04
PTCH1-217ENST00000548420 TRMT11Q7Z4G4 463 aaKnown RBP14.79□□□□□ -0.04
PTCH1-217ENST00000548420 THEM5Q8N1Q8 247 aa14.79□□□□□ -0.04
PTCH1-217ENST00000548420 DCBLD1Q8N8Z6 715 aa14.79□□□□□ -0.04
PTCH1-217ENST00000548420 SPPL2BQ8TCT7 592 aa14.79□□□□□ -0.04
PTCH1-217ENST00000548420 HPDLQ96IR7 371 aa14.79□□□□□ -0.04
PTCH1-217ENST00000548420 GABRG3Q99928 467 aa14.79□□□□□ -0.04
PTCH1-217ENST00000548420 GTPBP4Q9BZE4 634 aaKnown RBP14.79□□□□□ -0.04
PTCH1-217ENST00000548420 USP36Q9P275 1121 aaKnown RBP14.79□□□□□ -0.04
PTCH1-217ENST00000548420 HOOK1Q9UJC3 728 aaKnown RBP14.79□□□□□ -0.04
PTCH1-217ENST00000548420 LRRIQ3A6PVS8 624 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-217ENST00000548420 WASH3PC4AMC7 463 aa14.78□□□□□ -0.04
PTCH1-217ENST00000548420 IKBKBO14920 756 aa14.78□□□□□ -0.04
PTCH1-217ENST00000548420 HUS1O60921 280 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms