RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 RNF217Q8TC41 542 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 STK32AQ8WU08 396 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 PRCCQ92733 491 aaPredicted RBP17.11■□□□□ 0.33
BRF1-208ENST00000546997 HNRNPABQ99729 332 aaKnown RBP17.11■□□□□ 0.33
BRF1-208ENST00000546997 B3GNT5Q9BYG0 378 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 TMLHEQ9NVH6 421 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 WHRNQ9P202 907 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 HESX1Q9UBX0 185 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 GBF1Q92538 1859 aa17.11■□□□□ 0.33
BRF1-208ENST00000546997 TCRBV5S1A1TA0A578 114 aa17.1■□□□□ 0.33
BRF1-208ENST00000546997 EME2A4GXA9 379 aaPredicted RBP17.1■□□□□ 0.33
BRF1-208ENST00000546997 PIK3R2O00459 728 aa17.1■□□□□ 0.33
BRF1-208ENST00000546997 TNRC18O15417 2968 aaPredicted RBP17.1■□□□□ 0.33
BRF1-208ENST00000546997 HNRNPCL1O60812 293 aaKnown RBP17.1■□□□□ 0.33
BRF1-208ENST00000546997 OAZ2O95190 189 aa17.1■□□□□ 0.33
BRF1-208ENST00000546997 EFEMP2O95967 443 aa17.1■□□□□ 0.33
BRF1-208ENST00000546997 ERBB2P04626 1255 aa17.1■□□□□ 0.33
BRF1-208ENST00000546997 FGFR3P22607 806 aa17.1■□□□□ 0.33
BRF1-208ENST00000546997 RASSF2P50749 326 aa17.1■□□□□ 0.33
BRF1-208ENST00000546997 RTP2Q5QGT7 225 aa17.1■□□□□ 0.33
BRF1-208ENST00000546997 SPOUT1Q5T280 376 aaKnown RBP17.1■□□□□ 0.33
BRF1-208ENST00000546997 DAB2IPQ5VWQ8 1189 aa17.1■□□□□ 0.33
BRF1-208ENST00000546997 CWF19L1Q69YN2 538 aaKnown RBP17.1■□□□□ 0.33
BRF1-208ENST00000546997 CCDC137Q6PK04 289 aaKnown RBP17.1■□□□□ 0.33
BRF1-208ENST00000546997 KCNT2Q6UVM3 1135 aa17.1■□□□□ 0.33
BRF1-208ENST00000546997 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.1■□□□□ 0.33
BRF1-208ENST00000546997 SLC35F5Q8WV83 523 aa17.1■□□□□ 0.33
BRF1-208ENST00000546997 IGSF21Q96ID5 467 aa17.1■□□□□ 0.33
BRF1-208ENST00000546997 TSC22D3Q99576 134 aa17.1■□□□□ 0.33
BRF1-208ENST00000546997 RHOBTB2Q9BYZ6 727 aa17.1■□□□□ 0.33
BRF1-208ENST00000546997 DNAI2Q9GZS0 605 aa17.1■□□□□ 0.33
BRF1-208ENST00000546997 TMEM30AQ9NV96 361 aa17.1■□□□□ 0.33
BRF1-208ENST00000546997 LGALS13Q9UHV8 139 aa17.1■□□□□ 0.33
BRF1-208ENST00000546997 TMEM191CA6NGB0 347 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 BEST1O76090 585 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 OR4Q2P0C623 313 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 COILP38432 576 aaPredicted RBP17.09■□□□□ 0.33
BRF1-208ENST00000546997 PEX19P40855 299 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 RGS7P49802 495 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 PAPOLAP51003 745 aaKnown RBP17.09■□□□□ 0.33
BRF1-208ENST00000546997 BCAT1P54687 386 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 HTRA4P83105 476 aaPredicted RBP17.09■□□□□ 0.33
BRF1-208ENST00000546997 CAV1Q03135 178 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 FAM171BQ6P995 826 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 RHOT1Q8IXI2 618 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 THEM5Q8N1Q8 247 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 HERVK_113Q902F9 699 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 MYLPFQ96A32 169 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 KRT82Q9NSB4 513 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 ASB3Q9Y575 518 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 PATJQ8NI35 1801 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 TRAFD1O14545 582 aaPredicted RBP17.09■□□□□ 0.33
BRF1-208ENST00000546997 PSTPIP1O43586 416 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 GABBR2O75899 941 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 MAN1A1P33908 653 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 CACNA2D1P54289 1103 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 TAS2R40P59535 323 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 RPL7AP62424 266 aaKnown RBP17.09■□□□□ 0.33
BRF1-208ENST00000546997 PLCB3Q01970 1234 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 BST2Q10589 180 aaKnown RBP17.09■□□□□ 0.33
BRF1-208ENST00000546997 SETDB1Q15047 1291 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 TSNAXIP1Q2TAA8 658 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 SYDE1Q6ZW31 735 aaPredicted RBP17.09■□□□□ 0.33
BRF1-208ENST00000546997 FAM35AQ86V20 835 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 GALNT15Q8N3T1 639 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 LBHD1Q9BQE6 289 aaPredicted RBP17.09■□□□□ 0.33
BRF1-208ENST00000546997 MED10Q9BTT4 135 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 LRRC19Q9H756 370 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 IP6K2Q9UHH9 426 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 STK38LQ9Y2H1 464 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 STARD13Q9Y3M8 1113 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 PLXNA4Q9HCM2 1894 aa17.09■□□□□ 0.33
BRF1-208ENST00000546997 E5RJQ4 531 aa17.08■□□□□ 0.33
BRF1-208ENST00000546997 LINC00271P0C7V0 271 aa17.08■□□□□ 0.33
BRF1-208ENST00000546997 RABGGTBP53611 331 aa17.08■□□□□ 0.33
BRF1-208ENST00000546997 SLC18A1P54219 525 aa17.08■□□□□ 0.33
BRF1-208ENST00000546997 CALCOCO2Q13137 446 aa17.08■□□□□ 0.33
BRF1-208ENST00000546997 MRPL58Q14197 206 aaKnown RBP17.08■□□□□ 0.33
BRF1-208ENST00000546997 ANO7Q6IWH7 933 aa17.08■□□□□ 0.33
BRF1-208ENST00000546997 RGS9BPQ6ZS82 235 aa17.08■□□□□ 0.33
BRF1-208ENST00000546997 CLEC20AQ6ZU45 233 aa17.08■□□□□ 0.33
BRF1-208ENST00000546997 SLC39A11Q8N1S5 342 aa17.08■□□□□ 0.33
BRF1-208ENST00000546997 ZNF558Q96NG5 402 aa17.08■□□□□ 0.33
BRF1-208ENST00000546997 SYNCQ9H7C4 482 aa17.08■□□□□ 0.33
BRF1-208ENST00000546997 PAPOLBQ9NRJ5 636 aaKnown RBP17.08■□□□□ 0.33
BRF1-208ENST00000546997 SLC4A7Q9Y6M7 1214 aa17.08■□□□□ 0.33
BRF1-208ENST00000546997 SMIM23A6NLE4 172 aa17.08■□□□□ 0.32
BRF1-208ENST00000546997 NPR3P17342 541 aa17.08■□□□□ 0.32
BRF1-208ENST00000546997 TSPY1Q01534 308 aa17.08■□□□□ 0.32
BRF1-208ENST00000546997 ELAVL2Q12926 359 aaKnown RBP17.08■□□□□ 0.32
BRF1-208ENST00000546997 LLGL1Q15334 1064 aa17.08■□□□□ 0.32
BRF1-208ENST00000546997 PPP1R15BQ5SWA1 713 aa17.08■□□□□ 0.32
BRF1-208ENST00000546997 XYLT1Q86Y38 959 aa17.08■□□□□ 0.32
BRF1-208ENST00000546997 HERC6Q8IVU3 1022 aa17.08■□□□□ 0.32
BRF1-208ENST00000546997 RNF168Q8IYW5 571 aaPredicted RBP17.08■□□□□ 0.32
BRF1-208ENST00000546997 KIF2BQ8N4N8 673 aa17.08■□□□□ 0.32
BRF1-208ENST00000546997 COLGALT1Q8NBJ5 622 aa17.08■□□□□ 0.32
BRF1-208ENST00000546997 PIWIL1Q96J94 861 aaKnown RBP17.08■□□□□ 0.32
BRF1-208ENST00000546997 ZBED2Q9BTP6 218 aa17.08■□□□□ 0.32
BRF1-208ENST00000546997 DUSP16Q9BY84 665 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms