RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 OPHN1O60890 802 aa13.18□□□□□ -0.3
COPS7A-221ENST00000546229 DKK1O94907 266 aa13.18□□□□□ -0.3
COPS7A-221ENST00000546229 PRKCHP24723 683 aa13.18□□□□□ -0.3
COPS7A-221ENST00000546229 CD6P30203 668 aa13.18□□□□□ -0.3
COPS7A-221ENST00000546229 CORO1AP31146 461 aaKnown RBP13.18□□□□□ -0.3
COPS7A-221ENST00000546229 NDUFA8P51970 172 aa13.18□□□□□ -0.3
COPS7A-221ENST00000546229 GOLGA8FQ08AF8 430 aa13.18□□□□□ -0.3
COPS7A-221ENST00000546229 GOLGA8DPQ0D2H9 430 aa13.18□□□□□ -0.3
COPS7A-221ENST00000546229 SLC14A1Q13336 389 aa13.18□□□□□ -0.3
COPS7A-221ENST00000546229 PM20D1Q6GTS8 502 aa13.18□□□□□ -0.3
COPS7A-221ENST00000546229 NUDT18Q6ZVK8 323 aa13.18□□□□□ -0.3
COPS7A-221ENST00000546229 PIGZQ86VD9 579 aa13.18□□□□□ -0.3
COPS7A-221ENST00000546229 ZC3H3Q8IXZ2 948 aaKnown RBP13.18□□□□□ -0.3
COPS7A-221ENST00000546229 FAM186BQ8IYM0 893 aa13.18□□□□□ -0.3
COPS7A-221ENST00000546229 CPXM2Q8N436 756 aa13.18□□□□□ -0.3
COPS7A-221ENST00000546229 UBR7Q8N806 425 aa13.18□□□□□ -0.3
COPS7A-221ENST00000546229 FAXDC2Q96IV6 333 aa13.18□□□□□ -0.3
COPS7A-221ENST00000546229 ITM2CQ9NQX7 267 aa13.18□□□□□ -0.3
COPS7A-221ENST00000546229 FRMD4BQ9Y2L6 1034 aa13.18□□□□□ -0.3
COPS7A-221ENST00000546229 TMEM131Q92545 1883 aa13.18□□□□□ -0.3
COPS7A-221ENST00000546229 NYNRINQ9P2P1 1898 aaKnown RBP13.18□□□□□ -0.3
COPS7A-221ENST00000546229 APC2O95996 2303 aa13.18□□□□□ -0.3
COPS7A-221ENST00000546229 TP53BP1Q12888 1972 aaPredicted RBP13.18□□□□□ -0.3
COPS7A-221ENST00000546229 C10orf142B7Z368 130 aa13.17□□□□□ -0.3
COPS7A-221ENST00000546229 CALUO43852 315 aaPredicted RBP13.17□□□□□ -0.3
COPS7A-221ENST00000546229 SH3BP5O60239 455 aa13.17□□□□□ -0.3
COPS7A-221ENST00000546229 NCAM1P13591 858 aa13.17□□□□□ -0.3
COPS7A-221ENST00000546229 MAOBP27338 520 aa13.17□□□□□ -0.3
COPS7A-221ENST00000546229 HOXD9P28356 352 aaPredicted RBP13.17□□□□□ -0.3
COPS7A-221ENST00000546229 TPMTP51580 245 aa13.17□□□□□ -0.3
COPS7A-221ENST00000546229 ZNF132P52740 706 aa13.17□□□□□ -0.3
COPS7A-221ENST00000546229 ZNF234Q14588 700 aa13.17□□□□□ -0.3
COPS7A-221ENST00000546229 TRIP4Q15650 581 aaPredicted RBP13.17□□□□□ -0.3
COPS7A-221ENST00000546229 ANKS1BQ7Z6G8 1248 aa13.17□□□□□ -0.3
COPS7A-221ENST00000546229 KIAA0907Q7Z7F0 614 aaPredicted RBP13.17□□□□□ -0.3
COPS7A-221ENST00000546229 GLRX5Q86SX6 157 aa13.17□□□□□ -0.3
COPS7A-221ENST00000546229 NAXDQ8IW45 347 aa13.17□□□□□ -0.3
COPS7A-221ENST00000546229 CHCHD4Q8N4Q1 142 aa13.17□□□□□ -0.3
COPS7A-221ENST00000546229 TOE1Q96GM8 510 aaKnown RBP13.17□□□□□ -0.3
COPS7A-221ENST00000546229 UBXN6Q9BZV1 441 aa13.17□□□□□ -0.3
COPS7A-221ENST00000546229 IL21RQ9HBE5 538 aa13.17□□□□□ -0.3
COPS7A-221ENST00000546229 CISHQ9NSE2 258 aa13.17□□□□□ -0.3
COPS7A-221ENST00000546229 TOR4AQ9NXH8 423 aa13.17□□□□□ -0.3
COPS7A-221ENST00000546229 RASAL2Q9UJF2 1139 aa13.17□□□□□ -0.3
COPS7A-221ENST00000546229 STOML2Q9UJZ1 356 aa13.17□□□□□ -0.3
COPS7A-221ENST00000546229 CFAP45Q9UL16 551 aa13.17□□□□□ -0.3
COPS7A-221ENST00000546229 FASNP49327 2511 aaKnown RBP13.16□□□□□ -0.3
COPS7A-221ENST00000546229 H0Y626 953 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 NPC1O15118 1278 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 GABBR2O75899 941 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 TRIM16O95361 564 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 GTF2H1P32780 548 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 COG7P83436 770 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 EFEMP1Q12805 493 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 EIF4HQ15056 248 aaKnown RBP13.16□□□□□ -0.3
COPS7A-221ENST00000546229 ZNF423Q2M1K9 1284 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 EDRF1Q3B7T1 1238 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 CBWD6Q4V339 395 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 PKDCCQ504Y2 493 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 ZNF394Q53GI3 561 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 CBWD3Q5JTY5 395 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 CBWD5Q5RIA9 395 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 KIAA1324Q6UXG2 1013 aaKnown RBP13.16□□□□□ -0.3
COPS7A-221ENST00000546229 DBX2Q6ZNG2 339 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 HDDC3Q8N4P3 179 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 ZCCHC9Q8N567 271 aaKnown RBP13.16□□□□□ -0.3
COPS7A-221ENST00000546229 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.16□□□□□ -0.3
COPS7A-221ENST00000546229 CADM4Q8NFZ8 388 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 ADAMTS14Q8WXS8 1223 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 SORCS1Q8WY21 1168 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 FOXJ1Q92949 421 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 CDK5RAP1Q96SZ6 601 aaKnown RBP13.16□□□□□ -0.3
COPS7A-221ENST00000546229 ORAI3Q9BRQ5 295 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 IMPG2Q9BZV3 1241 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 TMEM245Q9H330 911 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 FAM124BQ9H5Z6 455 aaPredicted RBP13.16□□□□□ -0.3
COPS7A-221ENST00000546229 PRDM16Q9HAZ2 1276 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 ELOVL2Q9NXB9 296 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 MARCH2Q9P0N8 246 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 SUSD2Q9UGT4 822 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 PCOLCE2Q9UKZ9 415 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 MAPK8IP1Q9UQF2 711 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 ZNF510Q9Y2H8 683 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 COQ4Q9Y3A0 265 aa13.16□□□□□ -0.3
COPS7A-221ENST00000546229 CLSTN1O94985 981 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 SYPP08247 313 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 HMBSP08397 361 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 FTH1P19P0C7X4 201 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 ZNF883P0CG24 379 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 HLA-FP30511 346 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 CHKAP35790 457 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 PSMC2P35998 433 aaKnown RBP13.15□□□□□ -0.3
COPS7A-221ENST00000546229 MXI1P50539 228 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 SGSHP51688 502 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 RING1Q06587 406 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 CAMK2GQ13555 558 aaPredicted RBP13.15□□□□□ -0.3
COPS7A-221ENST00000546229 HNRNPDQ14103 355 aaKnown RBP13.15□□□□□ -0.3
COPS7A-221ENST00000546229 PTPRNQ16849 979 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 PLEKHG6Q3KR16 790 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 KRT39Q6A163 491 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms