RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 PLXNA2O75051 1894 aa16.25■□□□□ 0.19
CLSTN3-216ENST00000545663 A0A1W2PNU3 283 aaPredicted RBP16.25■□□□□ 0.19
CLSTN3-216ENST00000545663 FAM47DPA6NHR8 397 aa16.25■□□□□ 0.19
CLSTN3-216ENST00000545663 EFSO43281 561 aa16.25■□□□□ 0.19
CLSTN3-216ENST00000545663 RBP5P82980 135 aa16.25■□□□□ 0.19
CLSTN3-216ENST00000545663 SERINC3Q13530 473 aa16.25■□□□□ 0.19
CLSTN3-216ENST00000545663 TMEM215Q68D42 235 aa16.25■□□□□ 0.19
CLSTN3-216ENST00000545663 POMGNT1Q8WZA1 660 aa16.25■□□□□ 0.19
CLSTN3-216ENST00000545663 PSMG3-AS1Q96PY0 264 aa16.25■□□□□ 0.19
CLSTN3-216ENST00000545663 MRPL45Q9BRJ2 306 aaKnown RBP16.25■□□□□ 0.19
CLSTN3-216ENST00000545663 B3GNT5Q9BYG0 378 aa16.25■□□□□ 0.19
CLSTN3-216ENST00000545663 DPEP3Q9H4B8 488 aa16.25■□□□□ 0.19
CLSTN3-216ENST00000545663 ITGA11Q9UKX5 1188 aa16.25■□□□□ 0.19
CLSTN3-216ENST00000545663 ENO4A6NNW6 628 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 TRIM38O00635 465 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 NPC1O15118 1278 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 ZDHHC11BP0C7U3 371 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 WARSP23381 471 aaKnown RBP16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 CCR10P46092 362 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 RPS14P62263 151 aaKnown RBP16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 GTF2BQ00403 316 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 CAMK2GQ13555 558 aaPredicted RBP16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 ARL13BQ3SXY8 428 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 CDCP2Q5VXM1 449 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 KIAA0895LQ68EN5 471 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 SLFN12LQ6IEE8 588 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 SERPINA13PQ6UXR4 307 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 OVCA2Q8WZ82 227 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 EXTL1Q92935 676 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 SAAL1Q96ER3 474 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 HPDLQ96IR7 371 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 PIWIL1Q96J94 861 aaKnown RBP16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 RAB34Q9BZG1 259 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 CIPCQ9C0C6 399 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 MTMR12Q9C0I1 747 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 AASDHPPTQ9NRN7 309 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 THSD1Q9NS62 852 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 NBASA2RRP1 2371 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 CKAP5Q14008 2032 aa16.24■□□□□ 0.19
CLSTN3-216ENST00000545663 A0A1W2PPC4 97 aa16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 A0A1W2PR77 199 aa16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 SIGLEC6O43699 453 aa16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 TLR5O60602 858 aa16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 CSO75390 466 aaKnown RBP16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 RTN3O95197 1032 aaPredicted RBP16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 FAM87AP0C7U9 286 aa16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 PTPN1P18031 435 aaKnown RBP16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 TUBP50607 506 aa16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 E2F1Q01094 437 aa16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 POU5F1Q01860 360 aaKnown RBP16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 DHX8Q14562 1220 aaKnown RBP16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 FYB2Q5VWT5 728 aa16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 DPH6Q7L8W6 267 aa16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 CACTINQ8WUQ7 758 aaKnown RBP16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 UCMAQ8WVF2 138 aa16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 MMS19Q96T76 1030 aa16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 ZHX3Q9H4I2 956 aa16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 UPF2Q9HAU5 1272 aaKnown RBP16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 GDF3Q9NR23 364 aa16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 KCND2Q9NZV8 630 aa16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 SEPT3Q9UH03 358 aa16.23■□□□□ 0.19
CLSTN3-216ENST00000545663 PMS2P1A4D2B8 440 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 CLEC18AA5D8T8 446 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 MDM4O15151 490 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 OPA1O60313 960 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 SDC3O75056 442 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 FAM13AO94988 1023 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 PENKP01210 267 aaPredicted RBP16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 CD38P28907 300 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 GNL1P36915 607 aaPredicted RBP16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 ARRB1P49407 418 aaPredicted RBP16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 TOB1P50616 345 aaPredicted RBP16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 ZNF131P52739 623 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 SKOR1P84550 965 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 GRIN1Q05586 938 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 KCNJ12Q14500 433 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 IGFBP7Q16270 282 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 ME3Q16798 604 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 ZSCAN23Q3MJ62 389 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 HYIQ5T013 277 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 CLEC18BQ6UXF7 455 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 GPBP1Q86WP2 473 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 CLEC18CQ8NCF0 446 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 ELOVL4Q9GZR5 314 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 GZF1Q9H116 711 aaPredicted RBP16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 OSBPL2Q9H1P3 480 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 PARVGQ9HBI0 331 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 PDE11AQ9HCR9 933 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 IL37Q9NZH6 218 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 NUDT5Q9UKK9 219 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 ODF2LQ9ULJ1 636 aa16.22■□□□□ 0.19
CLSTN3-216ENST00000545663 GOLGA8IPA6NC78 632 aa16.21■□□□□ 0.19
CLSTN3-216ENST00000545663 GOLGA8JA6NMD2 632 aa16.21■□□□□ 0.19
CLSTN3-216ENST00000545663 SLC5A3P53794 718 aa16.21■□□□□ 0.19
CLSTN3-216ENST00000545663 CLN3Q13286 438 aa16.21■□□□□ 0.19
CLSTN3-216ENST00000545663 Q6ZNB5 142 aa16.21■□□□□ 0.19
CLSTN3-216ENST00000545663 SPATS2Q86XZ4 545 aaKnown RBP16.21■□□□□ 0.19
CLSTN3-216ENST00000545663 BRSK2Q8IWQ3 736 aa16.21■□□□□ 0.19
CLSTN3-216ENST00000545663 OR5B17Q8NGF7 314 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms