RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 ZNF592Q92610 1267 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 PSMG2Q969U7 264 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 PGAP3Q96FM1 320 aaPredicted RBP9.92□□□□□ -0.82
YBX3-215ENST00000544504 PBKQ96KB5 322 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 GCNAQ96QF7 691 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 WDR24Q96S15 920 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 TBCBQ99426 244 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 CRISPLD1Q9H336 500 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 DZANK1Q9NVP4 752 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 ZDHHC7Q9NXF8 308 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 DDX56Q9NY93 547 aaKnown RBP9.92□□□□□ -0.82
YBX3-215ENST00000544504 TRPM5Q9NZQ8 1165 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 RNF14Q9UBS8 474 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 CHORDC1Q9UHD1 332 aaPredicted RBP9.92□□□□□ -0.82
YBX3-215ENST00000544504 ZMYM5Q9UJ78 669 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 HYOU1Q9Y4L1 999 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 R4GN57 208 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 TPRP12270 2363 aaKnown RBP9.92□□□□□ -0.82
YBX3-215ENST00000544504 SPDYE4A6NLX3 237 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 PRPSAP2O60256 369 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 GRAP2O75791 330 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 ZMYND10O75800 440 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 ENDOD1O94919 500 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 FTCDO95954 541 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 SLC2A3P11169 496 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 NCAM1P13591 858 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 PFKLP17858 780 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 CTNNA1P35221 906 aaKnown RBP9.91□□□□□ -0.82
YBX3-215ENST00000544504 SSR1P43307 286 aaKnown RBP9.91□□□□□ -0.82
YBX3-215ENST00000544504 GPR15P49685 360 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 SULT1E1P49888 294 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 TUBP50607 506 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 CDR1P51861 262 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 RWDD2BP57060 319 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 TAF10Q12962 218 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 NNTQ13423 1086 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 CCDC14Q49A88 953 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 BOLA3Q53S33 107 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 ATAT1Q5SQI0 421 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 ACBD5Q5T8D3 534 aaPredicted RBP9.91□□□□□ -0.82
YBX3-215ENST00000544504 SNX30Q5VWJ9 437 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 MSANTD2Q6P1R3 559 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 RSRC2Q7L4I2 434 aaKnown RBP9.91□□□□□ -0.82
YBX3-215ENST00000544504 DNAJB7Q7Z6W7 309 aaPredicted RBP9.91□□□□□ -0.82
YBX3-215ENST00000544504 PSTKQ8IV42 348 aaKnown RBP9.91□□□□□ -0.82
YBX3-215ENST00000544504 SIX5Q8N196 739 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 EMC1Q8N766 993 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 CLEC4CQ8WTT0 213 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 SLC22A17Q8WUG5 538 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 CENPIQ92674 756 aaPredicted RBP9.91□□□□□ -0.82
YBX3-215ENST00000544504 NT5C3BQ969T7 300 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 ACSF2Q96CM8 615 aaPredicted RBP9.91□□□□□ -0.82
YBX3-215ENST00000544504 HES6Q96HZ4 224 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 PIWIL1Q96J94 861 aaKnown RBP9.91□□□□□ -0.82
YBX3-215ENST00000544504 NAP1L3Q99457 506 aaPredicted RBP9.91□□□□□ -0.82
YBX3-215ENST00000544504 NPY6RQ99463 290 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 TRIM7Q9C029 511 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 CARD9Q9H257 536 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 FAM204AQ9H8W3 233 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 FBXL21Q9UKT6 434 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 SNX12Q9UMY4 172 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 MAGED2Q9UNF1 606 aaPredicted RBP9.91□□□□□ -0.82
YBX3-215ENST00000544504 DUSP12Q9UNI6 340 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 PCDHA3Q9Y5H8 950 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 SAR1BQ9Y6B6 198 aa9.91□□□□□ -0.82
YBX3-215ENST00000544504 CACNA1GO43497 2377 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 CEP250Q9BV73 2442 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 A0A1W2PQH9 124 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 SOBPA7XYQ1 873 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 M0QYT0 321 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 LRCH4O75427 683 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 SOAT2O75908 522 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 GJB6O95452 261 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 ZDHHC11BP0C7U3 371 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 HMGA1P17096 107 aaKnown RBP9.9□□□□□ -0.82
YBX3-215ENST00000544504 CDC25CP30307 473 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 RDXP35241 583 aaKnown RBP9.9□□□□□ -0.82
YBX3-215ENST00000544504 ZNF135P52742 658 aaPredicted RBP9.9□□□□□ -0.82
YBX3-215ENST00000544504 OGDHQ02218 1023 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 DEUP1Q05D60 604 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 ZNF252P-AS1Q0IIN9 211 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 TAF5Q15542 800 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 ARL13BQ3SXY8 428 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 SDHAF4Q5VUM1 108 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 KLHDC10Q6PID8 442 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 BHLHA9Q7RTU4 235 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 SCD5Q86SK9 330 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 MAP7D3Q8IWC1 876 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 KATNAL2Q8IYT4 538 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 FAM172AQ8WUF8 416 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 TEKT4Q8WW24 435 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 MRPS31Q92665 395 aaKnown RBP9.9□□□□□ -0.82
YBX3-215ENST00000544504 CD101Q93033 1021 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 RBM41Q96IZ5 413 aaKnown RBP9.9□□□□□ -0.82
YBX3-215ENST00000544504 BTBD6Q96KE9 485 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 CFAP57Q96MR6 1250 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 SERPINB11Q96P15 392 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 TLR10Q9BXR5 811 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 MAN1C1Q9NR34 630 aa9.9□□□□□ -0.82
YBX3-215ENST00000544504 ASAH2Q9NR71 780 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms