RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 TTC13Q8NBP0 860 aa31.59■■■□□ 2.65
CCM2-219ENST00000544363 RNF34Q969K3 372 aa31.59■■■□□ 2.65
CCM2-219ENST00000544363 SAMD11Q96NU1 681 aa31.59■■■□□ 2.65
CCM2-219ENST00000544363 TKTL2Q9H0I9 626 aa31.59■■■□□ 2.65
CCM2-219ENST00000544363 PLEKHA4Q9H4M7 779 aa31.59■■■□□ 2.65
CCM2-219ENST00000544363 RCOR3Q9P2K3 495 aaPredicted RBP31.59■■■□□ 2.65
CCM2-219ENST00000544363 PTGIRP43119 386 aa31.58■■■□□ 2.65
CCM2-219ENST00000544363 KCNJ1P48048 391 aa31.58■■■□□ 2.65
CCM2-219ENST00000544363 EPHB3P54753 998 aa31.58■■■□□ 2.65
CCM2-219ENST00000544363 BRMS1LQ5PSV4 323 aa31.58■■■□□ 2.65
CCM2-219ENST00000544363 TRAF3IP1Q8TDR0 691 aaPredicted RBP31.58■■■□□ 2.65
CCM2-219ENST00000544363 TRMT2BQ96GJ1 504 aaKnown RBP31.58■■■□□ 2.65
CCM2-219ENST00000544363 TGS1Q96RS0 853 aaKnown RBP31.58■■■□□ 2.65
CCM2-219ENST00000544363 FAM187AA6NFU0 413 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 I6L893 689 aaPredicted RBP31.57■■■□□ 2.64
CCM2-219ENST00000544363 SPATA31D3P0C874 917 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 MCM3P25205 808 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 KLRC2P26717 231 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 ARL4AP40617 200 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 VSNL1P62760 191 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 TAF12Q16514 161 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 SPATA31D4Q6ZUB0 917 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 PCDH19Q8TAB3 1148 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 FAM118BQ9BPY3 351 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 ARHGEF38Q9NXL2 777 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 CWC15Q9P013 229 aaKnown RBP31.57■■■□□ 2.64
CCM2-219ENST00000544363 HIDE1A8MVS5 230 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 MSI1O43347 362 aaKnown RBP31.57■■■□□ 2.64
CCM2-219ENST00000544363 ZMYND10O75800 440 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 PLD1Q13393 1074 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 SNX30Q5VWJ9 437 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 DRICH1Q6PGQ1 229 aaPredicted RBP31.57■■■□□ 2.64
CCM2-219ENST00000544363 PQLC3Q8N755 202 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 SLCO2A1Q92959 643 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 HAUS1Q96CS2 278 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 CSPG4P5Q96PW8 444 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 HINFPQ9BQA5 517 aa31.57■■■□□ 2.64
CCM2-219ENST00000544363 FRMD8P1Q9BZ68 369 aaPredicted RBP31.57■■■□□ 2.64
CCM2-219ENST00000544363 GBF1Q92538 1859 aa31.56■■■□□ 2.64
CCM2-219ENST00000544363 APOC4-APOC2K7ER74 178 aa31.56■■■□□ 2.64
CCM2-219ENST00000544363 LIASO43766 372 aa31.56■■■□□ 2.64
CCM2-219ENST00000544363 APOC2P02655 101 aa31.56■■■□□ 2.64
CCM2-219ENST00000544363 CCR1P32246 355 aa31.56■■■□□ 2.64
CCM2-219ENST00000544363 GUCY2DQ02846 1103 aa31.56■■■□□ 2.64
CCM2-219ENST00000544363 PPP2R5DQ14738 602 aa31.56■■■□□ 2.64
CCM2-219ENST00000544363 SLC9A4Q6AI14 798 aa31.56■■■□□ 2.64
CCM2-219ENST00000544363 ZNF276Q8N554 614 aa31.56■■■□□ 2.64
CCM2-219ENST00000544363 ZNF512Q96ME7 567 aaPredicted RBP31.56■■■□□ 2.64
CCM2-219ENST00000544363 FEZ2Q9UHY8 353 aaPredicted RBP31.56■■■□□ 2.64
CCM2-219ENST00000544363 TLR6Q9Y2C9 796 aa31.56■■■□□ 2.64
CCM2-219ENST00000544363 H3BRJ5 948 aa31.55■■■□□ 2.64
CCM2-219ENST00000544363 APOL1O14791 398 aa31.55■■■□□ 2.64
CCM2-219ENST00000544363 GRM6O15303 877 aa31.55■■■□□ 2.64
CCM2-219ENST00000544363 CSPG5O95196 566 aa31.55■■■□□ 2.64
CCM2-219ENST00000544363 H2AFXP16104 143 aaPredicted RBP31.55■■■□□ 2.64
CCM2-219ENST00000544363 GOT1P17174 413 aa31.55■■■□□ 2.64
CCM2-219ENST00000544363 ERVK-21P61565 698 aa31.55■■■□□ 2.64
CCM2-219ENST00000544363 EFEMP1Q12805 493 aa31.55■■■□□ 2.64
CCM2-219ENST00000544363 NNTQ13423 1086 aa31.55■■■□□ 2.64
CCM2-219ENST00000544363 C10orf120Q5SQS8 335 aa31.55■■■□□ 2.64
CCM2-219ENST00000544363 DNAJB7Q7Z6W7 309 aaPredicted RBP31.55■■■□□ 2.64
CCM2-219ENST00000544363 JAMLQ86YT9 394 aa31.55■■■□□ 2.64
CCM2-219ENST00000544363 ATL2Q8NHH9 583 aa31.55■■■□□ 2.64
CCM2-219ENST00000544363 ACTL9Q8TC94 416 aa31.55■■■□□ 2.64
CCM2-219ENST00000544363 MICAL1Q8TDZ2 1067 aa31.55■■■□□ 2.64
CCM2-219ENST00000544363 PSMG2Q969U7 264 aa31.55■■■□□ 2.64
CCM2-219ENST00000544363 EPB41L5Q9HCM4 733 aa31.55■■■□□ 2.64
CCM2-219ENST00000544363 GDF3Q9NR23 364 aa31.55■■■□□ 2.64
CCM2-219ENST00000544363 YBX2Q9Y2T7 364 aaKnown RBP31.55■■■□□ 2.64
CCM2-219ENST00000544363 LAMA2P24043 3122 aaKnown RBP31.54■■■□□ 2.64
CCM2-219ENST00000544363 LPXNO60711 386 aa31.54■■■□□ 2.64
CCM2-219ENST00000544363 TBX18O95935 607 aa31.54■■■□□ 2.64
CCM2-219ENST00000544363 OTUD4Q01804 1114 aaKnown RBP31.54■■■□□ 2.64
CCM2-219ENST00000544363 CCDC149Q6ZUS6 474 aa31.54■■■□□ 2.64
CCM2-219ENST00000544363 ITIH5Q86UX2 942 aa31.54■■■□□ 2.64
CCM2-219ENST00000544363 IFT20Q8IY31 132 aa31.54■■■□□ 2.64
CCM2-219ENST00000544363 GRK7Q8WTQ7 553 aa31.54■■■□□ 2.64
CCM2-219ENST00000544363 CDK5RAP1Q96SZ6 601 aaKnown RBP31.54■■■□□ 2.64
CCM2-219ENST00000544363 GDF15Q99988 308 aa31.54■■■□□ 2.64
CCM2-219ENST00000544363 SAE1Q9UBE0 346 aaPredicted RBP31.54■■■□□ 2.64
CCM2-219ENST00000544363 RASAL2Q9UJF2 1139 aa31.54■■■□□ 2.64
CCM2-219ENST00000544363 DNPEPQ9ULA0 475 aa31.54■■■□□ 2.64
CCM2-219ENST00000544363 ZNF840PA6NDX5 716 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 ZSCAN5CA6NGD5 496 aaPredicted RBP31.53■■■□□ 2.64
CCM2-219ENST00000544363 BHMG1C9JSJ3 638 aaPredicted RBP31.53■■■□□ 2.64
CCM2-219ENST00000544363 TLR5O60602 858 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 TGM2P21980 687 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 SEMA3BQ13214 749 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 BYSLQ13895 437 aaKnown RBP31.53■■■□□ 2.64
CCM2-219ENST00000544363 CAMK1Q14012 370 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 BRD3Q15059 726 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 FBXO38Q6PIJ6 1188 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 PLD5Q8N7P1 536 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 KREMEN2Q8NCW0 462 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 SLC35B2Q8TB61 432 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 SLC39A13Q96H72 371 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 CCSER2Q9H7U1 834 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 PRDM16Q9HAZ2 1276 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 ARGLU1Q9NWB6 273 aaPredicted RBP31.53■■■□□ 2.64
CCM2-219ENST00000544363 TRPM5Q9NZQ8 1165 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms