RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 CLEC4DQ8WXI8 215 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 P2RX7Q99572 595 aaKnown RBP8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 EBNA1BP2Q99848 306 aaKnown RBP8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 CAAP1Q9H8G2 361 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 IARS2Q9NSE4 1012 aaKnown RBP8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 WARS2Q9UGM6 360 aaKnown RBP8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 VANGL2Q9ULK5 521 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 ORC6Q9Y5N6 252 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 AKAP11Q9UKA4 1901 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 PMPCBO75439 489 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 MAFO75444 373 aaPredicted RBP8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 CYP2C9P11712 490 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 ACO1P21399 889 aaKnown RBP8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 HSPA13P48723 471 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 CDK7P50613 346 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 ARPP19P56211 112 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 DCAF4L1Q3SXM0 396 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 CCDC153Q494R4 210 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 ZBTB41Q5SVQ8 909 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 FNBP1LQ5T0N5 605 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 RIPOR1Q6ZS17 1223 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 ALYREFQ86V81 257 aaKnown RBP8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 ZDHHC17Q8IUH5 632 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 TDRD5Q8NAT2 981 aaKnown RBP8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 CALML6Q8TD86 181 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 FNIP1Q8TF40 1166 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 THAP11Q96EK4 314 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 TSPAN17Q96FV3 270 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 CPXM1Q96SM3 734 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 LHX5Q9H2C1 402 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 MRPL46Q9H2W6 279 aaKnown RBP8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 APOBEC3GQ9HC16 384 aaKnown RBP8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 XPNPEP1Q9NQW7 623 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 CHST12Q9NRB3 414 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 NMRK1Q9NWW6 199 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 RABGEF1Q9UJ41 708 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 C2CD2Q9Y426 696 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 MYH13Q9UKX3 1938 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 UBA6A0AVT1 1052 aaPredicted RBP8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 RNF103O00237 685 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 DHX15O43143 795 aaKnown RBP8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 H2AFYO75367 372 aaKnown RBP8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 MYL4P12829 197 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 CRADDP78560 199 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 BLMHQ13867 455 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 INPP5AQ14642 412 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 KHDC1Q4VXA5 237 aaKnown RBP8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 THEMIS2Q5TEJ8 643 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 ANKRD22Q5VYY1 191 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 ARCQ7LC44 396 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 NET1Q7Z628 596 aaPredicted RBP8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 GIPC2Q8TF65 315 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 GDPD5Q8WTR4 605 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 SKA2Q8WVK7 121 aaPredicted RBP8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 CD101Q93033 1021 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 NMD3Q96D46 503 aaKnown RBP8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 SNRNP25Q9BV90 132 aaKnown RBP8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 FAM192AQ9GZU8 254 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 SP110Q9HB58 689 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 NCKIPSDQ9NZQ3 722 aa8.44□□□□□ -1.06
PRKAB1-207ENST00000542698 LAMB4A4D0S4 1761 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 SNX2O60749 519 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 ANXA9O76027 345 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 TGDSO95455 350 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 F9P00740 461 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 NFICP08651 508 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 TPBGLP0DKB5 382 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 STMN1P16949 149 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 EEF1DP29692 281 aaKnown RBP8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 HDAC4P56524 1084 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 TMEM132BQ14DG7 1078 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 PCSK7Q16549 785 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 FBXO47Q5MNV8 452 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 GRTP1Q5TC63 336 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 ABI1Q8IZP0 508 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 ZNF516Q92618 1163 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 FBXL18Q96ME1 805 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 UBP1Q9NZI7 540 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 PLLPQ9Y342 182 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 KAT6AQ92794 2004 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 MAGEB16A2A368 324 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 H3BRB1 525 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 ANPEPP15144 967 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 PGAM1P18669 254 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 TFE3P19532 575 aaPredicted RBP8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 YWHAZP63104 245 aaKnown RBP8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 NSUN2Q08J23 767 aaKnown RBP eCLIP8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 NOMO1Q15155 1222 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 TCEAL1Q15170 157 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 ZC3H12AQ5D1E8 599 aaKnown RBP8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 TMCO4Q5TGY1 634 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 RNF148Q8N7C7 305 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 DDI1Q8WTU0 396 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 GFM2Q969S9 779 aaKnown RBP8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 DDX50Q9BQ39 737 aaKnown RBP8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 GPR88Q9GZN0 384 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 CDT1Q9H211 546 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 TUT1Q9H6E5 874 aaKnown RBP8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 EBF2Q9HAK2 575 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms