RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 HES2Q9Y543 173 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 A0A0A0MRY4 1105 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 TRIM49D1C9J1S8 452 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 HAS3O00219 553 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 SPTLC1O15269 473 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 KRT38O76015 456 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 PARNO95453 639 aaKnown RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 METTL18O95568 372 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 YBX3P16989 372 aaKnown RBP eCLIP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 ADORA2BP29275 332 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 LRPAP1P30533 357 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 ARL4AP40617 200 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 SERPINB4P48594 390 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 FKBP1BP68106 108 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 SARNPP82979 210 aaKnown RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 TMEM62Q0P6H9 643 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 SLC10A2Q12908 348 aaPredicted RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 SNX17Q15036 470 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 DBN1Q16643 649 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 SLC25A52Q3SY17 297 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 PLEKHG4Q58EX7 1191 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 UBXN11Q5T124 520 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 FAXCQ5TGI0 409 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 FAM91A1Q658Y4 838 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 STEAP4Q687X5 459 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 KCNT2Q6UVM3 1135 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 CEP57Q86XR8 500 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 CCDC185Q8N715 623 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 PPM1NQ8N819 430 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 C7orf31Q8N865 590 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 RAB3IL1Q8TBN0 382 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 SLC2A14Q8TDB8 520 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 AGAP11Q8TF27 550 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 PTPRN2Q92932 1015 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 SPATA13Q96N96 652 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 FAM111AQ96PZ2 611 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 SRPK1Q96SB4 655 aaKnown RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 HNRNPABQ99729 332 aaKnown RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 TUBB6Q9BUF5 446 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 TLE6Q9H808 572 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 CDHR5Q9HBB8 845 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 KANSL3Q9P2N6 904 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 ZFP69BQ9UJL9 534 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 FZD10Q9ULW2 581 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 TRIM33Q9UPN9 1127 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 PIN4Q9Y237 131 aaKnown RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 GINS2Q9Y248 185 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 PCDHA11Q9Y5I1 949 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 SRCAPQ6ZRS2 3230 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 GLTPD2A6NH11 291 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 OPHN1O60890 802 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 RFPL1O75677 317 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 T-ENOLP0DO92 83 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 LCP1P13796 627 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 TARSP26639 723 aaKnown RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 ATXN1P54253 815 aaKnown RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 SLC8A3P57103 927 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 CDK18Q07002 472 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 NAB1Q13506 487 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 MFSD10Q14728 455 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 CTC1Q2NKJ3 1217 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 TIFABQ6ZNK6 161 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 CLNKQ7Z7G1 428 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 CCNJLQ8IV13 435 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 CTAGE3PQ8IX95 158 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 ADGRF2Q8IZF7 708 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 FBXO41Q8TF61 875 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 TFB1MQ8WVM0 346 aaKnown RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 HTR3CQ8WXA8 447 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 KCTD13Q8WZ19 329 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 NT5C3BQ969T7 300 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 UTP4Q969X6 686 aaKnown RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 SLC7A6OSQ96CW6 309 aaPredicted RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 THOC1Q96FV9 657 aaKnown RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 C7orf26Q96N11 449 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 IQCGQ9H095 443 aaKnown RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 YY1AP1Q9H869 796 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 SMYD2Q9NRG4 433 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 MCM8Q9UJA3 840 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 MTO1Q9Y2Z2 717 aaKnown RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 PLLPQ9Y342 182 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 TSC2P49815 1807 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 WDR91A4D1P6 747 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 CXorf49A8MYA2 514 aaPredicted RBP6.76□□□□□ -1.33
PTPRO-208ENST00000542557 H3BRJ5 948 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 HGSO14964 777 aaPredicted RBP6.76□□□□□ -1.33
PTPRO-208ENST00000542557 DYNC1LI2O43237 492 aaPredicted RBP6.76□□□□□ -1.33
PTPRO-208ENST00000542557 HCRTO43612 131 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 HUS1O60921 280 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 ALDH1A2O94788 518 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 MAP3K6O95382 1288 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 CSH1P0DML2 217 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 CSH2P0DML3 217 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 VAV1P15498 845 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 AKAP5P24588 427 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 LMO2P25791 158 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 TKTP29401 623 aaKnown RBP6.76□□□□□ -1.33
PTPRO-208ENST00000542557 NOS2P35228 1153 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 GLUD2P49448 558 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 SULT1E1P49888 294 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms