RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 TRIM62Q9BVG3 475 aa16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 EPC1Q9H2F5 836 aa16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 FAM207AQ9NSI2 230 aaPredicted RBP16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 NAALADL1Q9UQQ1 740 aa16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 EP300Q09472 2414 aaPredicted RBP16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 MYO18AQ92614 2054 aaKnown RBP16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 CCDC163A0A0D9SF12 145 aa16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 LMNAP02545 664 aaKnown RBP16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 FNTBP49356 437 aa16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 SEC13P55735 322 aa16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 POLR2FP61218 127 aaKnown RBP16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 YWHAZP63104 245 aaKnown RBP16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 NNTQ13423 1086 aa16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 SYCP1Q15431 976 aa16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 TAF5Q15542 800 aa16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 C2orf27AQ580R0 203 aa16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 SYPL2Q5VXT5 272 aa16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 LONP2Q86WA8 852 aa16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 CAMKK1Q8N5S9 505 aa16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 C1orf131Q8NDD1 294 aaKnown RBP16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 KCNV2Q8TDN2 545 aa16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 AZIN2Q96A70 460 aa16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 PIWIL1Q96J94 861 aaKnown RBP16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 NOX5Q96PH1 765 aa16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 POPDC2Q9HBU9 364 aa16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 DNAJC17Q9NVM6 304 aaKnown RBP16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 ASNSD1Q9NWL6 643 aa16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 HCN2Q9UL51 889 aa16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 MMP17Q9ULZ9 603 aa16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 SLC8A2Q9UPR5 921 aa16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 STARD13Q9Y3M8 1113 aa16.11■□□□□ 0.17
ECHDC2-223ENST00000542552 EML5Q05BV3 1969 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 TBC1D3BA6NDS4 549 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 SMTNL1A8MU46 457 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 IGLV3-25P01717 112 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 GLI1P08151 1106 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 PTMSP20962 102 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 ZNF165P49910 485 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 UBXN1Q04323 297 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 EIF4EBP2Q13542 120 aaPredicted RBP16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 DMC1Q14565 340 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 IQCB1Q15051 598 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 HSF5Q4G112 596 aaPredicted RBP16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 PTPN20Q4JDL3 420 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 ADGRF1Q5T601 910 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 EMC10Q5UCC4 262 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 GRAMD4Q6IC98 578 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 NOP9Q86U38 636 aaKnown RBP16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 WDR5BQ86VZ2 330 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 IL17RCQ8NAC3 791 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 EPS8L1Q8TE68 723 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 FAM149B1Q96BN6 582 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 SLC39A13Q96H72 371 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 FCRL2Q96LA5 508 aaPredicted RBP16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 SLC2A13Q96QE2 648 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 PLK2Q9NYY3 685 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 NOCTQ9UK39 431 aaKnown RBP16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 TLR6Q9Y2C9 796 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 SLC27A6Q9Y2P4 619 aa16.1■□□□□ 0.17
ECHDC2-223ENST00000542552 DMXL1Q9Y485 3027 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 HRO43593 1189 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 LSM8O95777 96 aaKnown RBP16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 ERBB2P04626 1255 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 CNR2P34972 360 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 GABRB2P47870 512 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 TBX4P57082 545 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 SNX16P57768 344 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 EFHC1Q5JVL4 640 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 NUGGCQ68CJ6 796 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 OLFML1Q6UWY5 402 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 TOGARAM2Q6ZUX3 1019 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 NUDT18Q6ZVK8 323 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 TAC4Q86UU9 113 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 UNC45BQ8IWX7 931 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 ALLCQ8N6M5 410 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 TMEM35BQ8NCS4 154 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 BHMTQ93088 406 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 SERPINB11Q96P15 392 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 SLC2A11Q9BYW1 496 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 IRX2Q9BZI1 471 aaPredicted RBP16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 NLRC4Q9NPP4 1024 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 EBF1Q9UH73 591 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 CEP83Q9Y592 693 aa16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 PTPRZ1P23471 2315 aaPredicted RBP16.09■□□□□ 0.17
ECHDC2-223ENST00000542552 SYCE3A1L190 88 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 PRRT4C9JH25 899 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 SGK1O00141 431 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 CAPN9O14815 690 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 ADAM23O75077 832 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 GFPT2O94808 682 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 CYBBP04839 570 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 TIE1P35590 1138 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 SOX5P35711 763 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 PXNP49023 591 aaPredicted RBP16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 DGKGP49619 791 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 ZNF445P59923 1031 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 FAM133BQ5BKY9 247 aaKnown RBP16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 C10orf76Q5T2E6 689 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 RNF43Q68DV7 783 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 HEATR6Q6AI08 1181 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms