RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 ANKS1BQ7Z6G8 1248 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 SYT12Q8IV01 421 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 DENND1CQ8IV53 801 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 TRIM59Q8IWR1 403 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 PPM1KQ8N3J5 372 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 TRIML1Q8N9V2 468 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 LMO3Q8TAP4 145 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 UCMAQ8WVF2 138 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 IRGQQ8WZA9 623 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 P2RY11Q96G91 374 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 SLC2A11Q9BYW1 496 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 ABCC13Q9NSE7 274 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 PLK2Q9NYY3 685 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 STOML2Q9UJZ1 356 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 NDUFV2P19404 249 aa16.34■□□□□ 0.21
VPS33A-206ENST00000542310 HARS2P49590 506 aaKnown RBP16.34■□□□□ 0.21
VPS33A-206ENST00000542310 DAOAP59103 153 aa16.34■□□□□ 0.21
VPS33A-206ENST00000542310 LMAN2Q12907 356 aa16.34■□□□□ 0.21
VPS33A-206ENST00000542310 ENPP2Q13822 863 aa16.34■□□□□ 0.21
VPS33A-206ENST00000542310 CNGA2Q16280 664 aa16.34■□□□□ 0.21
VPS33A-206ENST00000542310 DAB2IPQ5VWQ8 1189 aa16.34■□□□□ 0.21
VPS33A-206ENST00000542310 BSPRYQ5W0U4 402 aa16.34■□□□□ 0.21
VPS33A-206ENST00000542310 ISM2Q6H9L7 571 aa16.34■□□□□ 0.21
VPS33A-206ENST00000542310 RABEPKQ7Z6M1 372 aa16.34■□□□□ 0.21
VPS33A-206ENST00000542310 FMNL3Q8IVF7 1028 aa16.34■□□□□ 0.21
VPS33A-206ENST00000542310 RNF139Q8WU17 664 aa16.34■□□□□ 0.21
VPS33A-206ENST00000542310 SLC35F5Q8WV83 523 aa16.34■□□□□ 0.21
VPS33A-206ENST00000542310 PIGKQ92643 395 aa16.34■□□□□ 0.21
VPS33A-206ENST00000542310 BHMTQ93088 406 aa16.34■□□□□ 0.21
VPS33A-206ENST00000542310 PIWIL1Q96J94 861 aaKnown RBP16.34■□□□□ 0.21
VPS33A-206ENST00000542310 ACOX2Q99424 681 aa16.34■□□□□ 0.21
VPS33A-206ENST00000542310 IRX2Q9BZI1 471 aaPredicted RBP16.34■□□□□ 0.21
VPS33A-206ENST00000542310 TMEM9BQ9NQ34 198 aa16.34■□□□□ 0.21
VPS33A-206ENST00000542310 PCDHB4Q9Y5E5 795 aa16.34■□□□□ 0.21
VPS33A-206ENST00000542310 PCDH15Q96QU1 1955 aa16.34■□□□□ 0.21
VPS33A-206ENST00000542310 TPRP12270 2363 aaKnown RBP16.33■□□□□ 0.2
VPS33A-206ENST00000542310 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.33■□□□□ 0.2
VPS33A-206ENST00000542310 IGHV1OR15-9A0A0B4J2B8 117 aa16.33■□□□□ 0.2
VPS33A-206ENST00000542310 YJEFN3A6XGL0 299 aa16.33■□□□□ 0.2
VPS33A-206ENST00000542310 E7ENQ6 273 aa16.33■□□□□ 0.2
VPS33A-206ENST00000542310 M0QYV0 167 aa16.33■□□□□ 0.2
VPS33A-206ENST00000542310 FGFR1OPO95684 399 aaKnown RBP16.33■□□□□ 0.2
VPS33A-206ENST00000542310 WASP42768 502 aa16.33■□□□□ 0.2
VPS33A-206ENST00000542310 STARD3Q14849 445 aa16.33■□□□□ 0.2
VPS33A-206ENST00000542310 MEA1Q16626 185 aa16.33■□□□□ 0.2
VPS33A-206ENST00000542310 KIAA1211LQ6NV74 962 aa16.33■□□□□ 0.2
VPS33A-206ENST00000542310 TMEFF1Q8IYR6 380 aa16.33■□□□□ 0.2
VPS33A-206ENST00000542310 RBBP8NLQ8NC74 664 aaPredicted RBP16.33■□□□□ 0.2
VPS33A-206ENST00000542310 UBA3Q8TBC4 463 aa16.33■□□□□ 0.2
VPS33A-206ENST00000542310 TFAP2BQ92481 460 aa16.33■□□□□ 0.2
VPS33A-206ENST00000542310 HSFY1Q96LI6 401 aa16.33■□□□□ 0.2
VPS33A-206ENST00000542310 NUSAP1Q9BXS6 441 aaKnown RBP16.33■□□□□ 0.2
VPS33A-206ENST00000542310 CACNA2D2Q9NY47 1150 aa16.33■□□□□ 0.2
VPS33A-206ENST00000542310 THAP10Q9P2Z0 257 aaPredicted RBP16.33■□□□□ 0.2
VPS33A-206ENST00000542310 PILRBQ9UKJ0 227 aa16.33■□□□□ 0.2
VPS33A-206ENST00000542310 FBXO21O94952 628 aa16.32■□□□□ 0.2
VPS33A-206ENST00000542310 AFPP02771 609 aaKnown RBP16.32■□□□□ 0.2
VPS33A-206ENST00000542310 PTGER3P43115 390 aa16.32■□□□□ 0.2
VPS33A-206ENST00000542310 RPL6Q02878 288 aaKnown RBP16.32■□□□□ 0.2
VPS33A-206ENST00000542310 KCNH2Q12809 1159 aa16.32■□□□□ 0.2
VPS33A-206ENST00000542310 GEN1Q17RS7 908 aa16.32■□□□□ 0.2
VPS33A-206ENST00000542310 MPPE1Q53F39 396 aa16.32■□□□□ 0.2
VPS33A-206ENST00000542310 TRIM61Q5EBN2 209 aa16.32■□□□□ 0.2
VPS33A-206ENST00000542310 SLC23A3Q6PIS1 610 aa16.32■□□□□ 0.2
VPS33A-206ENST00000542310 METTL3Q86U44 580 aaKnown RBP16.32■□□□□ 0.2
VPS33A-206ENST00000542310 FRMD1Q8N878 549 aa16.32■□□□□ 0.2
VPS33A-206ENST00000542310 CEP76Q8TAP6 659 aa16.32■□□□□ 0.2
VPS33A-206ENST00000542310 NDRG1Q92597 394 aaKnown RBP16.32■□□□□ 0.2
VPS33A-206ENST00000542310 MRGPRX1Q96LB2 322 aa16.32■□□□□ 0.2
VPS33A-206ENST00000542310 CNTN6Q9UQ52 1028 aa16.32■□□□□ 0.2
VPS33A-206ENST00000542310 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.32■□□□□ 0.2
VPS33A-206ENST00000542310 STON1Q9Y6Q2 735 aa16.32■□□□□ 0.2
VPS33A-206ENST00000542310 ACACBO00763 2458 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 GON4LQ3T8J9 2241 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 ASCC3Q8N3C0 2202 aaKnown RBP16.31■□□□□ 0.2
VPS33A-206ENST00000542310 C4orf47A7E2U8 309 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 PATE3B3GLJ2 98 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 GADD45BO75293 160 aaPredicted RBP16.31■□□□□ 0.2
VPS33A-206ENST00000542310 KCNK5O95279 499 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 IGLV3-27P01718 113 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 BRD2P25440 801 aaKnown RBP16.31■□□□□ 0.2
VPS33A-206ENST00000542310 HOXD9P28356 352 aaPredicted RBP16.31■□□□□ 0.2
VPS33A-206ENST00000542310 PMLP29590 882 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 RING1Q06587 406 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 NUGGCQ68CJ6 796 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 SMYD5Q6GMV2 418 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 PMF1Q6P1K2 205 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 ARMCX6Q7L4S7 300 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 ARHGEF19Q8IW93 802 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 ZNF557Q8N988 423 aaPredicted RBP16.31■□□□□ 0.2
VPS33A-206ENST00000542310 EHBP1Q8NDI1 1231 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 WFIKKN2Q8TEU8 576 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 DDI1Q8WTU0 396 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 EDEM1Q92611 657 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 GOLGA1Q92805 767 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 KAT5Q92993 513 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 FAM81BQ96LP2 452 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 ZSWIM1Q9BR11 485 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 SFMBT1Q9UHJ3 866 aa16.31■□□□□ 0.2
VPS33A-206ENST00000542310 RAD54BQ9Y620 910 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms