RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 MCF2P10911 925 aa16.58■□□□□ 0.25
VARS2-212ENST00000542001 CPA3P15088 417 aa16.58■□□□□ 0.25
VARS2-212ENST00000542001 TSPAN8P19075 237 aa16.58■□□□□ 0.25
VARS2-212ENST00000542001 ECHS1P30084 290 aa16.58■□□□□ 0.25
VARS2-212ENST00000542001 COPAP53621 1224 aa16.58■□□□□ 0.25
VARS2-212ENST00000542001 SLC20A2Q08357 652 aa16.58■□□□□ 0.25
VARS2-212ENST00000542001 MGAT5BQ3V5L5 792 aa16.58■□□□□ 0.25
VARS2-212ENST00000542001 TAS2R42Q7RTR8 314 aa16.58■□□□□ 0.25
VARS2-212ENST00000542001 TTC7BQ86TV6 843 aa16.58■□□□□ 0.25
VARS2-212ENST00000542001 BBS5Q8N3I7 341 aa16.58■□□□□ 0.25
VARS2-212ENST00000542001 APOPT1Q96IL0 206 aa16.58■□□□□ 0.25
VARS2-212ENST00000542001 GPR20Q99678 358 aa16.58■□□□□ 0.25
VARS2-212ENST00000542001 MROH8Q9H579 483 aa16.58■□□□□ 0.25
VARS2-212ENST00000542001 HACD3Q9P035 362 aa16.58■□□□□ 0.25
VARS2-212ENST00000542001 KLRG2A4D1S0 409 aaPredicted RBP16.58■□□□□ 0.24
VARS2-212ENST00000542001 NCF1BA6NI72 391 aaPredicted RBP16.58■□□□□ 0.24
VARS2-212ENST00000542001 NCF1CA8MVU1 366 aaPredicted RBP16.58■□□□□ 0.24
VARS2-212ENST00000542001 ALOX15BO15296 676 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 PAPSS1O43252 624 aaPredicted RBP16.58■□□□□ 0.24
VARS2-212ENST00000542001 UGT1A9O60656 530 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 DNAJC6O75061 913 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 VAPBO95292 243 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 CETPP11597 493 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 NCF1P14598 390 aaPredicted RBP16.58■□□□□ 0.24
VARS2-212ENST00000542001 ZNF143P52747 638 aaPredicted RBP16.58■□□□□ 0.24
VARS2-212ENST00000542001 UBAP2LQ14157 1087 aaKnown RBP16.58■□□□□ 0.24
VARS2-212ENST00000542001 MPP2Q14168 576 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 ZNF235Q14590 738 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 TMEM63BQ5T3F8 832 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 ST13P4Q8IZP2 240 aaPredicted RBP16.58■□□□□ 0.24
VARS2-212ENST00000542001 EMID1Q96A84 441 aaPredicted RBP16.58■□□□□ 0.24
VARS2-212ENST00000542001 TBCBQ99426 244 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 ASB7Q9H672 318 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 UGT1A7Q9HAW7 530 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 UGT1A10Q9HAW8 530 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 UGT1A8Q9HAW9 530 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 MID2Q9UJV3 735 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 SYNPO2Q9UMS6 1093 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 TMEM63AO94886 807 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 IRF1P10914 325 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 BDNFP23560 247 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 YTHDF3Q7Z739 585 aaKnown RBP16.58■□□□□ 0.24
VARS2-212ENST00000542001 UNC5BQ8IZJ1 945 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 FGD4Q96M96 766 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 PIF1Q9H611 641 aa16.58■□□□□ 0.24
VARS2-212ENST00000542001 ALS2Q96Q42 1657 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 NFKBIEO00221 500 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 SUPT7LO94864 414 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 PROCP04070 461 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 GRIA1P42261 906 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 MAP7Q14244 749 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 CSHL1Q14406 222 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 CNGA3Q16281 694 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 SDHAF4Q5VUM1 108 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 LBX2Q6XYB7 198 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 PTAR1Q7Z6K3 402 aaPredicted RBP16.57■□□□□ 0.24
VARS2-212ENST00000542001 STKLD1Q8NE28 680 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 CAB39LQ9H9S4 337 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.57■□□□□ 0.24
VARS2-212ENST00000542001 COQ4Q9Y3A0 265 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 GNGT2O14610 69 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 DNAJC8O75937 253 aaPredicted RBP16.57■□□□□ 0.24
VARS2-212ENST00000542001 MPP3Q13368 585 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 PDK4Q16654 411 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 OMDQ99983 421 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 DPEP3Q9H4B8 488 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 UTP6Q9NYH9 597 aaKnown RBP16.57■□□□□ 0.24
VARS2-212ENST00000542001 PLA2G4CQ9UP65 541 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 ADGRA2Q96PE1 1338 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 CITO14578 2027 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 LGR5O75473 907 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 ACADSBP45954 432 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 CA9Q16790 459 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 TRMT10BQ6PF06 316 aaKnown RBP16.57■□□□□ 0.24
VARS2-212ENST00000542001 IZUMO2Q6UXV1 221 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 NRDE2Q9H7Z3 1164 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 VANGL2Q9ULK5 521 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 TNFSF13BQ9Y275 285 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 CNTNAP1P78357 1384 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 TRPM3Q9HCF6 1732 aaPredicted RBP16.57■□□□□ 0.24
VARS2-212ENST00000542001 CNTNAP2Q9UHC6 1331 aa16.57■□□□□ 0.24
VARS2-212ENST00000542001 TPP1O14773 563 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 ARL2P36404 184 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 PAPOLAP51003 745 aaKnown RBP16.56■□□□□ 0.24
VARS2-212ENST00000542001 SLC27A1Q6PCB7 646 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 CATSPER2Q96P56 530 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 FICDQ9BVA6 458 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 ACSS3Q9H6R3 686 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 ARL8BQ9NVJ2 186 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 SLIT2O94813 1529 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 A0A096LPK6 155 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 PLA2G6O60733 806 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 TADA2AO75478 443 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 CYP1A1P04798 512 aaPredicted RBP16.56■□□□□ 0.24
VARS2-212ENST00000542001 ITGAVP06756 1048 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 PAEPP09466 180 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 VHLP40337 213 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 PKNOX1P55347 436 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 USP4Q13107 963 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 PEX6Q13608 980 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms