RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 DQX1Q8TE96 717 aaKnown RBP9.62□□□□□ -0.87
SNHG1-215ENST00000540904 EZH1Q92800 747 aaPredicted RBP9.62□□□□□ -0.87
SNHG1-215ENST00000540904 C18orf8Q96DM3 657 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 SERPINB11Q96P15 392 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 PNKPQ96T60 521 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 IER2Q9BTL4 223 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 ARHGEF4Q9NR80 690 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 SEPT11Q9NVA2 429 aaKnown RBP9.62□□□□□ -0.87
SNHG1-215ENST00000540904 DNAJC17Q9NVM6 304 aaKnown RBP9.62□□□□□ -0.87
SNHG1-215ENST00000540904 PLK2Q9NYY3 685 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 WDR35Q9P2L0 1181 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 HELZP42694 1942 aaKnown RBP9.62□□□□□ -0.87
SNHG1-215ENST00000540904 F5P12259 2224 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 K7EQS6 105 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 TRIM24O15164 1050 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 CACNG3O60359 315 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 HSF2BPO75031 334 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 IGLV3-27P01718 113 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 CYBBP04839 570 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 APODP05090 189 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 GLI1P08151 1106 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 CCDC172P0C7W6 258 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 SP9P0CG40 484 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 GRIA2P42262 883 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 CXCL12P48061 93 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 SLC11A2P49281 568 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 CCR3P51677 355 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 RNASE9P60153 205 aaKnown RBP9.61□□□□□ -0.87
SNHG1-215ENST00000540904 PITX1P78337 314 aaPredicted RBP9.61□□□□□ -0.87
SNHG1-215ENST00000540904 CDK17Q00537 523 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 SATB1Q01826 763 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 SLC6A3Q01959 620 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 RING1Q06587 406 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 PPP2R5DQ14738 602 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 ADGRF1Q5T601 910 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 FAM102AQ5T9C2 384 aaPredicted RBP9.61□□□□□ -0.87
SNHG1-215ENST00000540904 NUGGCQ68CJ6 796 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 LRSAM1Q6UWE0 723 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 TRIM72Q6ZMU5 477 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 SLC26A9Q7LBE3 791 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 ZDHHC17Q8IUH5 632 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 UNC45BQ8IWX7 931 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 DEFB106AQ8N104 65 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 MSANTD4Q8NCY6 345 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 RNF214Q8ND24 703 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 RPLP0P6Q8NHW5 317 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 SLC30A5Q8TAD4 765 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 BAP1Q92560 729 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 FAM122AQ96E09 287 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 P2RY11Q96G91 374 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 SLC2A13Q96QE2 648 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 XPO6Q96QU8 1125 aaKnown RBP9.61□□□□□ -0.87
SNHG1-215ENST00000540904 PRMT8Q9NR22 394 aaPredicted RBP9.61□□□□□ -0.87
SNHG1-215ENST00000540904 ASNSD1Q9NWL6 643 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 C2orf42Q9NWW7 574 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 MARK1Q9P0L2 795 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 IFNKQ9P0W0 207 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 DEC1Q9P2X7 70 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 FBXO4Q9UKT5 387 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 TLR6Q9Y2C9 796 aa9.61□□□□□ -0.87
SNHG1-215ENST00000540904 SYNJ2BP-COX16A0A087WUM0 186 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 GOLGA6L7A0A1B0GV03 622 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 TBC1D3BA6NDS4 549 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 ANTXRLA6NF34 631 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 LRRC53A6NM62 1247 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 GOLGA8SH3BPF8 625 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 IRAK2O43187 625 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 TSPAN3O60637 253 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 ATG13O75143 517 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 LATS1O95835 1130 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 TRUB2O95900 331 aaKnown RBP9.6□□□□□ -0.87
SNHG1-215ENST00000540904 MOCS2O96007 188 aaPredicted RBP9.6□□□□□ -0.87
SNHG1-215ENST00000540904 PENKP01210 267 aaPredicted RBP9.6□□□□□ -0.87
SNHG1-215ENST00000540904 CYP1A1P04798 512 aaPredicted RBP9.6□□□□□ -0.87
SNHG1-215ENST00000540904 FERP16591 822 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 TIE1P35590 1138 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 PLA2G5P39877 138 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 GABRB2P47870 512 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 NME3Q13232 169 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 NNTQ13423 1086 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 PREPLQ4J6C6 727 aaPredicted RBP9.6□□□□□ -0.87
SNHG1-215ENST00000540904 C2orf27AQ580R0 203 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 ZC3H12AQ5D1E8 599 aaKnown RBP9.6□□□□□ -0.87
SNHG1-215ENST00000540904 GRAMD4Q6IC98 578 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 MMS22LQ6ZRQ5 1243 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 PHLDB2Q86SQ0 1253 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 XYLT1Q86Y38 959 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 FAM217AQ8IXS0 508 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 PHTF2Q8N3S3 785 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 CPXM2Q8N436 756 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 DDI1Q8WTU0 396 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 RNF34Q969K3 372 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 FCRL2Q96LA5 508 aaPredicted RBP9.6□□□□□ -0.87
SNHG1-215ENST00000540904 PCDHB18PQ96TA0 734 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 PHOX2BQ99453 314 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 FAM204AQ9H8W3 233 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 POLR3BQ9NW08 1133 aaPredicted RBP9.6□□□□□ -0.87
SNHG1-215ENST00000540904 DDIT4Q9NX09 232 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 COX16Q9P0S2 106 aa9.6□□□□□ -0.87
SNHG1-215ENST00000540904 MYO6Q9UM54 1294 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms