RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 CYBBP04839 570 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 OXTRP30559 389 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 CORO1AP31146 461 aaKnown RBP12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 IL12RB1P42701 662 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 SLC8A3P57103 927 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 EFEMP1Q12805 493 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 DPYDQ12882 1025 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 ADAM9Q13443 819 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 GEN1Q17RS7 908 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 EDRF1Q3B7T1 1238 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 ZNF394Q53GI3 561 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 ARHGAP17Q68EM7 881 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 ANKS1BQ7Z6G8 1248 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 RAB44Q7Z6P3 723 aaPredicted RBP12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 PIGZQ86VD9 579 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 FAM217AQ8IXS0 508 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 PLD4Q96BZ4 506 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 TOE1Q96GM8 510 aaKnown RBP12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 TMEM176AQ96HP8 235 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 PIWIL1Q96J94 861 aaKnown RBP12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 MKRN2Q9H000 416 aaKnown RBP12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 MARCH2Q9P0N8 246 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 AGO1Q9UL18 857 aaKnown RBP12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 PI4KAP42356 2102 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 MEI4A8MW99 385 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 TIMM44O43615 452 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 STX10O60499 249 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 SYNCRIPO60506 623 aaKnown RBP12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 MXI1P50539 228 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 YWHAGP61981 247 aaKnown RBP eCLIP12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 FAM193AP78312 1265 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 GRIK2Q13002 908 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 TRIP6Q15654 476 aaKnown RBP12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 ZCWPW2Q504Y3 356 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 PM20D1Q6GTS8 502 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 TMPRSS6Q8IU80 811 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 DENND1CQ8IV53 801 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 ANKRD52Q8NB46 1076 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 SLC4A11Q8NBS3 891 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 RBBP8NLQ8NC74 664 aaPredicted RBP12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 FBXL13Q8NEE6 735 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 OR2I1PQ8NGU4 316 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 PRCCQ92733 491 aaPredicted RBP12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 ERLEC1Q96DZ1 483 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 SIPA1Q96FS4 1042 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 SPATA32Q96LK8 384 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 PCED1AQ9H1Q7 454 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 MMRN2Q9H8L6 949 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 CISHQ9NSE2 258 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 RAB20Q9NX57 234 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 ELOVL2Q9NXB9 296 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 FAM208BQ5VWN6 2430 aa12.58□□□□□ -0.4
CBX3P4-202ENST00000540428 CACNA1EQ15878 2313 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 SLC12A8A0AV02 714 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 METTL12A8MUP2 240 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 SH3BP5O60239 455 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 HMBSP08397 361 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 PRR29P0C7W0 189 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 ZNF883P0CG24 379 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 C7P10643 843 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 NCAM1P13591 858 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 MAOBP27338 520 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 TPMTP51580 245 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 NDUFA8P51970 172 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 RAD23BP54727 409 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 ZNF445P59923 1031 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 KRT85P78386 507 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 ZNF234Q14588 700 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 TRIP4Q15650 581 aaPredicted RBP12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 MPPE1Q53F39 396 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 KRBA2Q6ZNG9 492 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 RSRC2Q7L4I2 434 aaKnown RBP12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 GLRX5Q86SX6 157 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 NAXDQ8IW45 347 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 CHCHD4Q8N4Q1 142 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 DDI1Q8WTU0 396 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 ADAMTS14Q8WXS8 1223 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 SEMA4DQ92854 862 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 NUP58Q9BVL2 599 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 GPR174Q9BXC1 333 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 OLA1Q9NTK5 396 aaKnown RBP12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 RALYQ9UKM9 306 aaKnown RBP12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 MAPK8IP1Q9UQF2 711 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 PCDHB9Q9Y5E1 797 aa12.57□□□□□ -0.4
CBX3P4-202ENST00000540428 IGF2RP11717 2491 aa12.56□□□□□ -0.4
CBX3P4-202ENST00000540428 A0A1W2PQ27 194 aa12.56□□□□□ -0.4
CBX3P4-202ENST00000540428 A0A1W2PQ64 194 aa12.56□□□□□ -0.4
CBX3P4-202ENST00000540428 KCNJ18B7U540 433 aa12.56□□□□□ -0.4
CBX3P4-202ENST00000540428 XPO1O14980 1071 aaKnown RBP12.56□□□□□ -0.4
CBX3P4-202ENST00000540428 LATS1O95835 1130 aa12.56□□□□□ -0.4
CBX3P4-202ENST00000540428 ZBED1O96006 694 aa12.56□□□□□ -0.4
CBX3P4-202ENST00000540428 ACADMP11310 421 aa12.56□□□□□ -0.4
CBX3P4-202ENST00000540428 TKTL1P51854 596 aa12.56□□□□□ -0.4
CBX3P4-202ENST00000540428 COPAP53621 1224 aa12.56□□□□□ -0.4
CBX3P4-202ENST00000540428 PDE4CQ08493 712 aa12.56□□□□□ -0.4
CBX3P4-202ENST00000540428 DCAF12L1Q5VU92 463 aa12.56□□□□□ -0.4
CBX3P4-202ENST00000540428 IL27RAQ6UWB1 636 aa12.56□□□□□ -0.4
CBX3P4-202ENST00000540428 ZCCHC9Q8N567 271 aaKnown RBP12.56□□□□□ -0.4
CBX3P4-202ENST00000540428 WFIKKN2Q8TEU8 576 aa12.56□□□□□ -0.4
CBX3P4-202ENST00000540428 CIPCQ9C0C6 399 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms