RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 NAALADL1Q9UQQ1 740 aa12.23□□□□□ -0.45
VTN-202ENST00000539746 ZNF840PA6NDX5 716 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 H0YGN5 161 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 EEF2KO00418 725 aaKnown RBP12.22□□□□□ -0.45
VTN-202ENST00000539746 SLC9A3R1O14745 358 aaPredicted RBP12.22□□□□□ -0.45
VTN-202ENST00000539746 IGLV3-25P01717 112 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 LINC00271P0C7V0 271 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 PYGMP11217 842 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 ATF6P18850 670 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 IGFBP6P24592 240 aaPredicted RBP12.22□□□□□ -0.45
VTN-202ENST00000539746 CDKN2BP42772 138 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 TPI1P60174 286 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 DR1Q01658 176 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 OGDHQ02218 1023 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 ZNF252P-AS1Q0IIN9 211 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 CUL1Q13616 776 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 PDK1Q15118 436 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 E2F5Q15329 346 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 TAZQ16635 292 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 CYP1B1Q16678 543 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 C15orf59Q2T9L4 293 aaPredicted RBP12.22□□□□□ -0.45
VTN-202ENST00000539746 PPP6R3Q5H9R7 873 aaPredicted RBP12.22□□□□□ -0.45
VTN-202ENST00000539746 C9orf50Q5SZB4 431 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 TMCO3Q6UWJ1 677 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 GSTA5Q7RTV2 222 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 GPRIN1Q7Z2K8 1008 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 PCGF5Q86SE9 256 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 DNAAF5Q86Y56 855 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 CDKL3Q8IVW4 592 aaPredicted RBP12.22□□□□□ -0.45
VTN-202ENST00000539746 CLEC4CQ8WTT0 213 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 COG1Q8WTW3 980 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 ALG3Q92685 438 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 KRT35Q92764 455 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 SLCO2A1Q92959 643 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 MAGOHBQ96A72 148 aaKnown RBP12.22□□□□□ -0.45
VTN-202ENST00000539746 E2F7Q96AV8 911 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 C17orf80Q9BSJ5 609 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 PBX4Q9BYU1 374 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 KIF9Q9HAQ2 790 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 PIDD1Q9HB75 910 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 ARHGEF38Q9NXL2 777 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 PPARGC1AQ9UBK2 798 aaKnown RBP12.22□□□□□ -0.45
VTN-202ENST00000539746 CHORDC1Q9UHD1 332 aaPredicted RBP12.22□□□□□ -0.45
VTN-202ENST00000539746 PCYOX1Q9UHG3 505 aa12.22□□□□□ -0.45
VTN-202ENST00000539746 DRG1Q9Y295 367 aaKnown RBP12.22□□□□□ -0.45
VTN-202ENST00000539746 ALPK3Q96L96 1907 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 hCG_1818297A0A087WSY0 165 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 GOLGA6CA6NDK9 693 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 GOLGA6BA6NDN3 693 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 KCNU1A8MYU2 1149 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 DYNC1I1O14576 645 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 GOLGA6DP0CG33 693 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 CHKAP35790 457 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 AVPR1AP37288 418 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 RABGGTBP53611 331 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 CACNA2D1P54289 1103 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 EFEMP1Q12805 493 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 CALCOCO2Q13137 446 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 BYSLQ13895 437 aaKnown RBP12.21□□□□□ -0.45
VTN-202ENST00000539746 TAF5Q15542 800 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 RSPO2Q6UXX9 243 aaPredicted RBP12.21□□□□□ -0.45
VTN-202ENST00000539746 TAC4Q86UU9 113 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 FAM131BQ86XD5 332 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 GIPC2Q8TF65 315 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 NSMCE1Q8WV22 266 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 EDEM1Q92611 657 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 KHSRPQ92945 711 aaKnown RBP eCLIP12.21□□□□□ -0.45
VTN-202ENST00000539746 OTUB2Q96DC9 234 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 TBC1D31Q96DN5 1066 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 SNRNP25Q9BV90 132 aaKnown RBP12.21□□□□□ -0.45
VTN-202ENST00000539746 FRMD8Q9BZ67 464 aaPredicted RBP12.21□□□□□ -0.45
VTN-202ENST00000539746 TRIM7Q9C029 511 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 TKTL2Q9H0I9 626 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 NSUN3Q9H649 340 aaKnown RBP12.21□□□□□ -0.45
VTN-202ENST00000539746 MAN1C1Q9NR34 630 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 FAM114A2Q9NRY5 505 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 PIGVQ9NUD9 493 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 GOLGA6AQ9NYA3 693 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 OR12D3Q9UGF7 316 aa12.21□□□□□ -0.45
VTN-202ENST00000539746 ZFP37Q9Y6Q3 630 aaPredicted RBP12.21□□□□□ -0.45
VTN-202ENST00000539746 SYNJ2BP-COX16A0A087WUM0 186 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 SLC12A8A0AV02 714 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 LCHNA4D1U4 455 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 F5H5T6 163 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 AP3B1O00203 1094 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 CTIFO43310 598 aaKnown RBP12.2□□□□□ -0.46
VTN-202ENST00000539746 CST8O60676 142 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 SRGAP2O75044 1071 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 CLASP2O75122 1294 aaKnown RBP12.2□□□□□ -0.46
VTN-202ENST00000539746 TADA3O75528 432 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 CYBBP04839 570 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 ITGAVP06756 1048 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 EPHA5P54756 1037 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 TAS2R40P59535 323 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 DPYSL3Q14195 570 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 PPP1R7Q15435 360 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 DUSP6Q16828 381 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 SMTNL2Q2TAL5 461 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 LRIT3Q3SXY7 679 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 ANKRD20A8PQ5CZ79 823 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms