RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 OSBPL8Q9BZF1 889 aa16.01■□□□□ 0.15
VAMP1-207ENST00000539047 HOMER3Q9NSC5 361 aa16.01■□□□□ 0.15
VAMP1-207ENST00000539047 DZANK1Q9NVP4 752 aa16.01■□□□□ 0.15
VAMP1-207ENST00000539047 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.01■□□□□ 0.15
VAMP1-207ENST00000539047 RCOR3Q9P2K3 495 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-207ENST00000539047 FZD10Q9ULW2 581 aa16.01■□□□□ 0.15
VAMP1-207ENST00000539047 EFR3BQ9Y2G0 817 aa16.01■□□□□ 0.15
VAMP1-207ENST00000539047 HBS1LQ9Y450 684 aaKnown RBP16.01■□□□□ 0.15
VAMP1-207ENST00000539047 HELZP42694 1942 aaKnown RBP16■□□□□ 0.15
VAMP1-207ENST00000539047 ZNF840PA6NDX5 716 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 ZNF487B1APH4 448 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 CCL16O15467 120 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 IGLV3-25P01717 112 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 EPCAMP16422 314 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 NRIP1P48552 1158 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 PITX1P78337 314 aaPredicted RBP16■□□□□ 0.15
VAMP1-207ENST00000539047 SCAPQ12770 1279 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 TRIP4Q15650 581 aaPredicted RBP16■□□□□ 0.15
VAMP1-207ENST00000539047 DPYSL2Q16555 572 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 DUSP6Q16828 381 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 ARHGAP15Q53QZ3 475 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 KAZNQ674X7 775 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 NUGGCQ68CJ6 796 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 TXNRD3NBQ6F5E7 133 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 RBM23Q86U06 439 aaKnown RBP16■□□□□ 0.15
VAMP1-207ENST00000539047 MIB1Q86YT6 1006 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 RFX6Q8HWS3 928 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 CCDC185Q8N715 623 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 ATP6V0D2Q8N8Y2 350 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 SLC22A17Q8WUG5 538 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 RUNDC3BQ96NL0 473 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 EPAS1Q99814 870 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 CORO1BQ9BR76 489 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 TKTL2Q9H0I9 626 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 PRDM16Q9HAZ2 1276 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 PIDD1Q9HB75 910 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 TRPC7Q9HCX4 862 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 OSER1Q9NX31 292 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 SFMBT1Q9UHJ3 866 aa16■□□□□ 0.15
VAMP1-207ENST00000539047 SLC12A8A0AV02 714 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 EFCAB8A8MWE9 144 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 DAPK3O43293 454 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 MSI1O43347 362 aaKnown RBP15.99■□□□□ 0.15
VAMP1-207ENST00000539047 POU2F2P09086 479 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 MYL4P12829 197 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 ZFXP17010 805 aaPredicted RBP15.99■□□□□ 0.15
VAMP1-207ENST00000539047 PTPN2P17706 415 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 PFKLP17858 780 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 GABRR2P28476 465 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 ADRA1BP35368 520 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 CDKN2BP42772 138 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 ATXN1P54253 815 aaKnown RBP15.99■□□□□ 0.15
VAMP1-207ENST00000539047 COG7P83436 770 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 ATP13A4Q4VNC1 1196 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 RAB6CQ53S08 254 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 MFSD7Q6UXD7 560 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 PDZD4Q76G19 769 aaPredicted RBP15.99■□□□□ 0.15
VAMP1-207ENST00000539047 UNC45BQ8IWX7 931 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 TTC13Q8NBP0 860 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 SPATA4Q8NEY3 305 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 RAPGEF5Q92565 580 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 RAB6CQ9H0N0 254 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 NSUN3Q9H649 340 aaKnown RBP15.99■□□□□ 0.15
VAMP1-207ENST00000539047 CCSER2Q9H7U1 834 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 SFXN1Q9H9B4 322 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 PCDH18Q9HCL0 1135 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 WDR6Q9NNW5 1121 aaKnown RBP15.99■□□□□ 0.15
VAMP1-207ENST00000539047 GPATCH2LQ9NWQ4 482 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 NUDT5Q9UKK9 219 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 HCFC2Q9Y5Z7 792 aa15.99■□□□□ 0.15
VAMP1-207ENST00000539047 hCG_1818297A0A087WSY0 165 aa15.98■□□□□ 0.15
VAMP1-207ENST00000539047 TMEM265A0A087WTH1 108 aa15.98■□□□□ 0.15
VAMP1-207ENST00000539047 PER2O15055 1255 aa15.98■□□□□ 0.15
VAMP1-207ENST00000539047 DDX6P26196 483 aaKnown RBP eCLIP15.98■□□□□ 0.15
VAMP1-207ENST00000539047 HTR7P34969 479 aa15.98■□□□□ 0.15
VAMP1-207ENST00000539047 TPI1P60174 286 aa15.98■□□□□ 0.15
VAMP1-207ENST00000539047 RING1Q06587 406 aa15.98■□□□□ 0.15
VAMP1-207ENST00000539047 C2orf54Q08AI8 447 aa15.98■□□□□ 0.15
VAMP1-207ENST00000539047 DPYSL3Q14195 570 aa15.98■□□□□ 0.15
VAMP1-207ENST00000539047 ZC3H12AQ5D1E8 599 aaKnown RBP15.98■□□□□ 0.15
VAMP1-207ENST00000539047 TEX35Q5T0J7 233 aa15.98■□□□□ 0.15
VAMP1-207ENST00000539047 CYP4V2Q6ZWL3 525 aaPredicted RBP15.98■□□□□ 0.15
VAMP1-207ENST00000539047 UBXN4Q92575 508 aa15.98■□□□□ 0.15
VAMP1-207ENST00000539047 PLD4Q96BZ4 506 aa15.98■□□□□ 0.15
VAMP1-207ENST00000539047 HAPLN3Q96S86 360 aa15.98■□□□□ 0.15
VAMP1-207ENST00000539047 HEMGNQ9BXL5 484 aa15.98■□□□□ 0.15
VAMP1-207ENST00000539047 ADAM33Q9BZ11 813 aa15.98■□□□□ 0.15
VAMP1-207ENST00000539047 FRMD8P1Q9BZ68 369 aaPredicted RBP15.98■□□□□ 0.15
VAMP1-207ENST00000539047 ZNF334Q9HCZ1 680 aaPredicted RBP15.98■□□□□ 0.15
VAMP1-207ENST00000539047 ARHGEF38Q9NXL2 777 aa15.98■□□□□ 0.15
VAMP1-207ENST00000539047 SMARCAL1Q9NZC9 954 aa15.98■□□□□ 0.15
VAMP1-207ENST00000539047 STIM2Q9P246 746 aa15.98■□□□□ 0.15
VAMP1-207ENST00000539047 ZMYM5Q9UJ78 669 aa15.98■□□□□ 0.15
VAMP1-207ENST00000539047 TRAV19A0A0A6YYK7 116 aa15.97■□□□□ 0.15
VAMP1-207ENST00000539047 PDE2AO00408 941 aaPredicted RBP15.97■□□□□ 0.15
VAMP1-207ENST00000539047 EEF2KO00418 725 aaKnown RBP15.97■□□□□ 0.15
VAMP1-207ENST00000539047 ZNF197O14709 1029 aa15.97■□□□□ 0.15
VAMP1-207ENST00000539047 APOL1O14791 398 aa15.97■□□□□ 0.15
VAMP1-207ENST00000539047 CREB3O43889 395 aa15.97■□□□□ 0.15
VAMP1-207ENST00000539047 MOCS2O96007 188 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms