RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 IQSEC1Q6DN90 963 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 UNC5AQ6ZN44 842 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 CYP4V2Q6ZWL3 525 aaPredicted RBP9□□□□□ -0.97
UBE3B-208ENST00000538070 ZNF410Q86VK4 478 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 CDKL3Q8IVW4 592 aaPredicted RBP9□□□□□ -0.97
UBE3B-208ENST00000538070 AGAP11Q8TF27 550 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 TFB1MQ8WVM0 346 aaKnown RBP9□□□□□ -0.97
UBE3B-208ENST00000538070 KHSRPQ92945 711 aaKnown RBP eCLIP9□□□□□ -0.97
UBE3B-208ENST00000538070 L3MBTL3Q96JM7 780 aaPredicted RBP9□□□□□ -0.97
UBE3B-208ENST00000538070 SMYD2Q9NRG4 433 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 GGA2Q9UJY4 613 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 KIAA1257Q9ULG3 409 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 LCTP09848 1927 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 MYADML2A6NDP7 307 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 RNF103O00237 685 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 EEF2KO00418 725 aaKnown RBP9□□□□□ -0.97
UBE3B-208ENST00000538070 EDF1O60869 148 aaKnown RBP9□□□□□ -0.97
UBE3B-208ENST00000538070 DIAPH2O60879 1101 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 ARPP19P56211 112 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 KDSRQ06136 332 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 LACTB2Q53H82 288 aaPredicted RBP9□□□□□ -0.97
UBE3B-208ENST00000538070 CAND1Q86VP6 1230 aaKnown RBP9□□□□□ -0.97
UBE3B-208ENST00000538070 FAM228AQ86W67 206 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 SPNS2Q8IVW8 549 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 KBTBD7Q8WVZ9 684 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 AZIN2Q96A70 460 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 TNIP3Q96KP6 325 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 ZNF560Q96MR9 790 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 PRDM12Q9H4Q4 367 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 DTLQ9NZJ0 730 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 PAPPA2Q9BXP8 1791 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 NRCAMQ92823 1304 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 NRP1O14786 923 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 TCEA3O75764 348 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 SNRPAP09012 282 aaKnown RBP8.99□□□□□ -0.97
UBE3B-208ENST00000538070 GHRP10912 638 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 MYL2P10916 166 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 PTPN1P18031 435 aaKnown RBP8.99□□□□□ -0.97
UBE3B-208ENST00000538070 BRCC3P46736 316 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 GABRB2P47870 512 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 CLCNKBP51801 687 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 ALDH18A1P54886 795 aaKnown RBP8.99□□□□□ -0.97
UBE3B-208ENST00000538070 RPL10AP62906 217 aaKnown RBP8.99□□□□□ -0.97
UBE3B-208ENST00000538070 ADGRD1Q6QNK2 874 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 SLC26A11Q86WA9 606 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 SCN4BQ8IWT1 228 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 ZC3H15Q8WU90 426 aaKnown RBP8.99□□□□□ -0.97
UBE3B-208ENST00000538070 HTR3CQ8WXA8 447 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 SENP8Q96LD8 212 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 SLC4A5Q9BY07 1137 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 CCDC134Q9H6E4 229 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 SENP1Q9P0U3 644 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 YJEFN3A6XGL0 299 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 E7ENQ6 273 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 FAM72CH0Y354 149 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 DFFAO00273 331 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 DNAJC8O75937 253 aaPredicted RBP8.99□□□□□ -0.97
UBE3B-208ENST00000538070 STK10O94804 968 aaKnown RBP8.99□□□□□ -0.97
UBE3B-208ENST00000538070 ZWINTO95229 277 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 CD4P01730 458 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 ENO1P06733 434 aaKnown RBP8.99□□□□□ -0.97
UBE3B-208ENST00000538070 SERPINB4P48594 390 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 XRCC4Q13426 336 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 KCNJ11Q14654 390 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 NAA25Q14CX7 972 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 STILQ15468 1287 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 KYAT1Q16773 422 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 PLEKHG4Q58EX7 1191 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 ANKRD20A2Q5SQ80 823 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 LGSNQ5TDP6 509 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 FAM72AQ5TYM5 149 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 ANKRD20A1Q5TYW2 823 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 SDHAF4Q5VUM1 108 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 FAM72DQ6L9T8 149 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 TMEM110Q86TL2 294 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 FAM72BQ86X60 149 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 DTX3LQ8TDB6 740 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 DENND1AQ8TEH3 1009 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 MCUR1Q96AQ8 359 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 MOCOSQ96EN8 888 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 TMEM120AQ9BXJ8 343 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 ATXN3LQ9H3M9 355 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 SLC12A4Q9UP95 1085 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 XPOTO43592 962 aaKnown RBP8.99□□□□□ -0.97
UBE3B-208ENST00000538070 TYROBPO43914 113 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 LYPLA1O75608 230 aaPredicted RBP8.99□□□□□ -0.97
UBE3B-208ENST00000538070 FAM200BP0CF97 657 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 VAV1P15498 845 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 BDNFP23560 247 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 THPOP40225 353 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 FSCN1Q16658 493 aaKnown RBP8.99□□□□□ -0.97
UBE3B-208ENST00000538070 SV2CQ496J9 727 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 SLC45A4Q5BKX6 768 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 PPM1JQ5JR12 505 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 SPRYD7Q5W111 196 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 IL31Q6EBC2 164 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 RSPH3Q86UC2 560 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 ALYREFQ86V81 257 aaKnown RBP8.99□□□□□ -0.97
UBE3B-208ENST00000538070 OR52K1Q8NGK4 314 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 RNF139Q8WU17 664 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms