RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 SYCE3A1L190 88 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 I6L893 689 aaPredicted RBP8.77□□□□□ -1.01
SPARC-208ENST00000538026 SGK1O00141 431 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 PES1O00541 588 aaKnown RBP8.77□□□□□ -1.01
SPARC-208ENST00000538026 CACNG3O60359 315 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 FBXO21O94952 628 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 ADH1CP00326 375 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 MMEP08473 750 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 TFE3P19532 575 aaPredicted RBP8.77□□□□□ -1.01
SPARC-208ENST00000538026 HOXA6P31267 233 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 SLC6A4P31645 630 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 EIF2DP41214 584 aaKnown RBP8.77□□□□□ -1.01
SPARC-208ENST00000538026 CCR3P51677 355 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 SEC13P55735 322 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 POLR2FP61218 127 aaKnown RBP8.77□□□□□ -1.01
SPARC-208ENST00000538026 GAD2Q05329 585 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 KDSRQ06136 332 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 NR1H3Q13133 447 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 RAPGEF1Q13905 1077 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 ANO4Q32M45 955 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 C2orf27AQ580R0 203 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 TAF3Q5VWG9 929 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 TMEM215Q68D42 235 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 TRNP1Q6NT89 227 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 OLFML1Q6UWY5 402 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 FAM183BPQ6ZVS7 135 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 BEND5Q7L4P6 421 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 TAC4Q86UU9 113 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 CCDC33Q8N5R6 958 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 IL17RCQ8NAC3 791 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 PPP1R13BQ96KQ4 1090 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 LMLNQ96KR4 655 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 SLC2A13Q96QE2 648 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 ERGIC2Q96RQ1 377 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 CDK5RAP1Q96SZ6 601 aaKnown RBP8.77□□□□□ -1.01
SPARC-208ENST00000538026 ACOX2Q99424 681 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 IER2Q9BTL4 223 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 BBS2Q9BXC9 721 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 IRF2BPLQ9H1B7 796 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 CBX8Q9HC52 389 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 NLRC4Q9NPP4 1024 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 RTN4Q9NQC3 1192 aaKnown RBP8.77□□□□□ -1.01
SPARC-208ENST00000538026 ANLNQ9NQW6 1124 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 ARHGEF4Q9NR80 690 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 ST7Q9NRC1 585 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 ZSCAN32Q9NX65 697 aa8.77□□□□□ -1.01
SPARC-208ENST00000538026 HBS1LQ9Y450 684 aaKnown RBP8.77□□□□□ -1.01
SPARC-208ENST00000538026 CKAP5Q14008 2032 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 THADAQ6YHU6 1953 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 DOCK4Q8N1I0 1966 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 NEDD8-MDP1E9PL57 170 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 MED7O43513 233 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 GFRA3O60609 400 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 TSPAN3O60637 253 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 GRAP2O75791 330 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 GFPT2O94808 682 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 NCAM1P13591 858 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 TGM1P22735 817 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 HOXD9P28356 352 aaPredicted RBP8.76□□□□□ -1.01
SPARC-208ENST00000538026 TIE1P35590 1138 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 GRIA2P42262 883 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 TNFRSF4P43489 277 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 ACADSBP45954 432 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 GABRB2P47870 512 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 ZNF165P49910 485 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 AMPD2Q01433 879 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 FMO1Q01740 532 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 UBXN1Q04323 297 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 PTK2Q05397 1052 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 PTP4A2Q12974 167 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 GEN1Q17RS7 908 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 FBXO43Q4G163 708 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 EGFLAMQ63HQ2 1017 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 E4F1Q66K89 784 aaPredicted RBP8.76□□□□□ -1.01
SPARC-208ENST00000538026 HEATR6Q6AI08 1181 aaKnown RBP8.76□□□□□ -1.01
SPARC-208ENST00000538026 RFWD3Q6PCD5 774 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 RSRC2Q7L4I2 434 aaKnown RBP8.76□□□□□ -1.01
SPARC-208ENST00000538026 SYT13Q7L8C5 426 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 TADA2BQ86TJ2 420 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 CPXM2Q8N436 756 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 DCLK2Q8N568 766 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 ALLCQ8N6M5 410 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 TERB1Q8NA31 727 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 WFDC5Q8TCV5 224 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 RNF139Q8WU17 664 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 BAP1Q92560 729 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 PLD4Q96BZ4 506 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 HHIPQ96QV1 700 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 SYT11Q9BT88 431 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 DEC1Q9P2X7 70 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 STARD13Q9Y3M8 1113 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 PCDHGA2Q9Y5H1 932 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 NUP205Q92621 2012 aa8.76□□□□□ -1.01
SPARC-208ENST00000538026 A0A1B0GTH6 734 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 A0A1W2PQF6 199 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 KCNU1A8MYU2 1149 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 WASH3PC4AMC7 463 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 CYP1A1P04798 512 aaPredicted RBP8.75□□□□□ -1.01
SPARC-208ENST00000538026 UNGP13051 313 aaPredicted RBP8.75□□□□□ -1.01
SPARC-208ENST00000538026 SOX5P35711 763 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms