RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 TKTL1P51854 596 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 ZNF132P52740 706 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 YWHAGP61981 247 aaKnown RBP eCLIP11.31□□□□□ -0.6
CCDC60-202ENST00000535685 UBE2HP62256 183 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 KCNH2Q12809 1159 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 PAK1Q13153 545 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 TRIP4Q15650 581 aaPredicted RBP11.31□□□□□ -0.6
CCDC60-202ENST00000535685 ELF2Q15723 593 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 MEA1Q16626 185 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 GOLGA7BQ2TAP0 167 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 ANO4Q32M45 955 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 SPDYCQ5MJ68 293 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 EMC10Q5UCC4 262 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 PMS2CLQ68D20 193 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 ISM2Q6H9L7 571 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 GRAMD4Q6IC98 578 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 KLHL10Q6JEL2 608 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 CCDC33Q8N5R6 958 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 EHBP1Q8NDI1 1231 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 ANKK1Q8NFD2 765 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 MDGA1Q8NFP4 955 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 PRR7Q8TB68 274 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 LRRN4Q8WUT4 740 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 SLC35F5Q8WV83 523 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 HSFY1Q96LI6 401 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 PRR14Q9BWN1 585 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 BBS2Q9BXC9 721 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 IRX2Q9BZI1 471 aaPredicted RBP11.31□□□□□ -0.6
CCDC60-202ENST00000535685 ARRDC1-AS1Q9H2J1 176 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 LRRC4Q9HBW1 653 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 CD248Q9HCU0 757 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 VPS45Q9NRW7 570 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 MARCH2Q9P0N8 246 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 NUDT5Q9UKK9 219 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 STRIP2Q9ULQ0 834 aa11.31□□□□□ -0.6
CCDC60-202ENST00000535685 HBS1LQ9Y450 684 aaKnown RBP11.31□□□□□ -0.6
CCDC60-202ENST00000535685 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.31□□□□□ -0.6
CCDC60-202ENST00000535685 CABIN1Q9Y6J0 2220 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 BCLAF3A2AJT9 711 aaKnown RBP11.3□□□□□ -0.6
CCDC60-202ENST00000535685 GOLGA8CPA6NN73 597 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 NEDD8-MDP1E9PL57 170 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 TULP2O00295 520 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 NPC1O15118 1278 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 LATS1O95835 1130 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 CD19P15391 556 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 NTSR1P30989 418 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 RPL34P49207 117 aaKnown RBP11.3□□□□□ -0.6
CCDC60-202ENST00000535685 ZNF445P59923 1031 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 KDSRQ06136 332 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 BYSLQ13895 437 aaKnown RBP11.3□□□□□ -0.6
CCDC60-202ENST00000535685 E2F5Q15329 346 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 FYB2Q5VWT5 728 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 ANO7Q6IWH7 933 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 MSANTD2Q6P1R3 559 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 TMEM270Q6UE05 265 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 ZNF513Q8N8E2 541 aaPredicted RBP11.3□□□□□ -0.6
CCDC60-202ENST00000535685 NAT16Q8N8M0 369 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 IRGQQ8WZA9 623 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 TFAP2BQ92481 460 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 PLD4Q96BZ4 506 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 GABRG3Q99928 467 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 ULBP1Q9BZM6 244 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 ABCC13Q9NSE7 274 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 DNAJC17Q9NVM6 304 aaKnown RBP11.3□□□□□ -0.6
CCDC60-202ENST00000535685 CHMP5Q9NZZ3 219 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 RASAL2Q9UJF2 1139 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 STOML2Q9UJZ1 356 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCDC60-202ENST00000535685 CTNND2Q9UQB3 1225 aa11.3□□□□□ -0.6
CCDC60-202ENST00000535685 PRRT4C9JH25 899 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 RNF225M0QZC1 329 aaPredicted RBP11.29□□□□□ -0.6
CCDC60-202ENST00000535685 TM4SF5O14894 197 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 AFPP02771 609 aaKnown RBP11.29□□□□□ -0.6
CCDC60-202ENST00000535685 CORO1AP31146 461 aaKnown RBP11.29□□□□□ -0.6
CCDC60-202ENST00000535685 MPLP40238 635 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 DGKGP49619 791 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 DAOAP59103 153 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 ADIGQ0VDE8 80 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 EFEMP1Q12805 493 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 LRMPQ12912 555 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 ENPP2Q13822 863 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 MAP7D1Q3KQU3 841 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 C10orf76Q5T2E6 689 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 BSPRYQ5W0U4 402 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 TPGS1Q6ZTW0 290 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 ENOSF1Q7L5Y1 443 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 RETREG3Q86VR2 466 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 MIB1Q86YT6 1006 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 PPM1KQ8N3J5 372 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 DDX1Q92499 740 aaKnown RBP11.29□□□□□ -0.6
CCDC60-202ENST00000535685 P2RY11Q96G91 374 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 FAM81BQ96LP2 452 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 ZSWIM1Q9BR11 485 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 SRRTQ9BXP5 876 aaKnown RBP11.29□□□□□ -0.6
CCDC60-202ENST00000535685 SLC2A11Q9BYW1 496 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 RWDD2AQ9UIY3 292 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 AGO1Q9UL18 857 aaKnown RBP11.29□□□□□ -0.6
CCDC60-202ENST00000535685 PCDHB4Q9Y5E5 795 aa11.29□□□□□ -0.6
CCDC60-202ENST00000535685 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.29□□□□□ -0.6
CCDC60-202ENST00000535685 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms