RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 LUC7L2Q9Y383 392 aaKnown RBP13.68□□□□□ -0.22
CHFR-210ENST00000535527 SIT1Q9Y3P8 196 aa13.68□□□□□ -0.22
CHFR-210ENST00000535527 ZFHX4Q86UP3 3567 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 SLC12A8A0AV02 714 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 GFRA2O00451 464 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 CHADO15335 359 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 IRAK2O43187 625 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 ADCY5O95622 1261 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 NCAM1P13591 858 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 CD72P21854 359 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 RRM1P23921 792 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 EIF4A3P38919 411 aaKnown RBP13.67□□□□□ -0.22
CHFR-210ENST00000535527 SGSHP51688 502 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 GSCP56915 257 aaPredicted RBP13.67□□□□□ -0.22
CHFR-210ENST00000535527 ZNF252P-AS1Q0IIN9 211 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 TRIP4Q15650 581 aaPredicted RBP13.67□□□□□ -0.22
CHFR-210ENST00000535527 TDRD12Q587J7 1177 aaKnown RBP13.67□□□□□ -0.22
CHFR-210ENST00000535527 FAM102AQ5T9C2 384 aaPredicted RBP13.67□□□□□ -0.22
CHFR-210ENST00000535527 SH3PXD2AQ5TCZ1 1133 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 NADSYN1Q6IA69 706 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 TRIM72Q6ZMU5 477 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 MCOLN2Q8IZK6 566 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 SUMF1Q8NBK3 374 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 IPO4Q8TEX9 1081 aaKnown RBP13.67□□□□□ -0.22
CHFR-210ENST00000535527 OSCP1Q8WVF1 389 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 C18orf8Q96DM3 657 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 SLC39A13Q96H72 371 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 PACSIN1Q9BY11 444 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 PDCL3Q9H2J4 239 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 TBC1D17Q9HA65 648 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 ABCC13Q9NSE7 274 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 DLGAP2Q9P1A6 1054 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 ZMYM5Q9UJ78 669 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 DNMT3LQ9UJW3 386 aa13.67□□□□□ -0.22
CHFR-210ENST00000535527 MTF2Q9Y483 593 aaPredicted RBP13.67□□□□□ -0.22
CHFR-210ENST00000535527 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.67□□□□□ -0.221e-6■■■□□ 14.7
CHFR-210ENST00000535527 EML5Q05BV3 1969 aa13.66□□□□□ -0.22
CHFR-210ENST00000535527 CHD5Q8TDI0 1954 aa13.66□□□□□ -0.22
CHFR-210ENST00000535527 SERPING1P05155 500 aa13.66□□□□□ -0.22
CHFR-210ENST00000535527 CHRM1P11229 460 aaPredicted RBP13.66□□□□□ -0.22
CHFR-210ENST00000535527 RALAP11233 206 aa13.66□□□□□ -0.22
CHFR-210ENST00000535527 YWHAZP63104 245 aaKnown RBP13.66□□□□□ -0.22
CHFR-210ENST00000535527 ZNF528Q3MIS6 628 aa13.66□□□□□ -0.22
CHFR-210ENST00000535527 ACAD10Q6JQN1 1059 aa13.66□□□□□ -0.22
CHFR-210ENST00000535527 CPNE8Q86YQ8 564 aa13.66□□□□□ -0.22
CHFR-210ENST00000535527 TMEM139Q8IV31 216 aa13.66□□□□□ -0.22
CHFR-210ENST00000535527 ARHGAP18Q8N392 663 aa13.66□□□□□ -0.22
CHFR-210ENST00000535527 DCLK2Q8N568 766 aa13.66□□□□□ -0.22
CHFR-210ENST00000535527 ARHGEF26Q96DR7 871 aa13.66□□□□□ -0.22
CHFR-210ENST00000535527 TBCBQ99426 244 aa13.66□□□□□ -0.22
CHFR-210ENST00000535527 NPY6RQ99463 290 aa13.66□□□□□ -0.22
CHFR-210ENST00000535527 FOXQ1Q9C009 403 aa13.66□□□□□ -0.22
CHFR-210ENST00000535527 BRD9Q9H8M2 597 aa13.66□□□□□ -0.22
CHFR-210ENST00000535527 POPDC2Q9HBU9 364 aa13.66□□□□□ -0.22
CHFR-210ENST00000535527 FBRSL1Q9HCM7 1045 aaKnown RBP13.66□□□□□ -0.22
CHFR-210ENST00000535527 ARHGEF3Q9NR81 526 aa13.66□□□□□ -0.22
CHFR-210ENST00000535527 ASNSD1Q9NWL6 643 aa13.66□□□□□ -0.22
CHFR-210ENST00000535527 ADAMTS1Q9UHI8 967 aa13.66□□□□□ -0.22
CHFR-210ENST00000535527 AGO1Q9UL18 857 aaKnown RBP13.66□□□□□ -0.22
CHFR-210ENST00000535527 MYO18AQ92614 2054 aaKnown RBP13.65□□□□□ -0.22
CHFR-210ENST00000535527 GOLGA6L7A0A1B0GV03 622 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 PRR5-ARHGAP8B1AHC4 643 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 DPYSL4O14531 572 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 TRIM24O15164 1050 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 HSF2BPO75031 334 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 TRUB2O95900 331 aaKnown RBP13.65□□□□□ -0.22
CHFR-210ENST00000535527 TPM3P06753 285 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 TNFAIP3P21580 790 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 FECHP22830 423 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 CORO1AP31146 461 aaKnown RBP13.65□□□□□ -0.22
CHFR-210ENST00000535527 SLC6A4P31645 630 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 SCNN1AP37088 669 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 GGCXP38435 758 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 OPRD1P41143 372 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 NSFP46459 744 aaKnown RBP13.65□□□□□ -0.22
CHFR-210ENST00000535527 IRAK1P51617 712 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 RNASE9P60153 205 aaKnown RBP13.65□□□□□ -0.22
CHFR-210ENST00000535527 RPL7AP62424 266 aaKnown RBP13.65□□□□□ -0.22
CHFR-210ENST00000535527 ARHGAP8P85298 464 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 GFPT1Q06210 699 aaPredicted RBP13.65□□□□□ -0.22
CHFR-210ENST00000535527 FZD5Q13467 585 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 TRIM14Q14142 442 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 MLF2Q15773 248 aaPredicted RBP13.65□□□□□ -0.22
CHFR-210ENST00000535527 C15orf59Q2T9L4 293 aaPredicted RBP13.65□□□□□ -0.22
CHFR-210ENST00000535527 ARHGAP29Q52LW3 1261 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 DCAF6Q58WW2 860 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 FAM133BQ5BKY9 247 aaKnown RBP13.65□□□□□ -0.22
CHFR-210ENST00000535527 RHBDF2Q6PJF5 856 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 HTR3DQ70Z44 454 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 RSRC2Q7L4I2 434 aaKnown RBP13.65□□□□□ -0.22
CHFR-210ENST00000535527 BEND5Q7L4P6 421 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 FAM217AQ8IXS0 508 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 DNASE1L2Q92874 299 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 NT5C3BQ969T7 300 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 E2F7Q96AV8 911 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 CFAP57Q96MR6 1250 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 PRICKLE1Q96MT3 831 aaPredicted RBP13.65□□□□□ -0.22
CHFR-210ENST00000535527 NOX5Q96PH1 765 aa13.65□□□□□ -0.22
CHFR-210ENST00000535527 DDX23Q9BUQ8 820 aaKnown RBP13.65□□□□□ -0.22
CHFR-210ENST00000535527 MAGEB5Q9BZ81 275 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms