RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 BEND5Q7L4P6 421 aa12.4□□□□□ -0.42
KNTC1-208ENST00000535410 ARHGEF19Q8IW93 802 aa12.4□□□□□ -0.42
KNTC1-208ENST00000535410 CCDC117Q8IWD4 279 aaPredicted RBP12.4□□□□□ -0.42
KNTC1-208ENST00000535410 MDGA1Q8NFP4 955 aa12.4□□□□□ -0.42
KNTC1-208ENST00000535410 HMGB4Q8WW32 186 aa12.4□□□□□ -0.42
KNTC1-208ENST00000535410 EDEM1Q92611 657 aa12.4□□□□□ -0.42
KNTC1-208ENST00000535410 KAT5Q92993 513 aa12.4□□□□□ -0.42
KNTC1-208ENST00000535410 TMA16Q96EY4 203 aaKnown RBP12.4□□□□□ -0.42
KNTC1-208ENST00000535410 CRACR2AQ9BSW2 395 aa12.4□□□□□ -0.42
KNTC1-208ENST00000535410 DUSP15Q9H1R2 295 aaPredicted RBP12.4□□□□□ -0.42
KNTC1-208ENST00000535410 PARD6AQ9NPB6 346 aa12.4□□□□□ -0.42
KNTC1-208ENST00000535410 ST7Q9NRC1 585 aa12.4□□□□□ -0.42
KNTC1-208ENST00000535410 POLR3BQ9NW08 1133 aaPredicted RBP12.4□□□□□ -0.42
KNTC1-208ENST00000535410 APEX2Q9UBZ4 518 aa12.4□□□□□ -0.42
KNTC1-208ENST00000535410 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.39□□□□□ -0.43
KNTC1-208ENST00000535410 TCRBV21S2A2A0A5A6 115 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 TYW5A2RUC4 315 aaKnown RBP12.39□□□□□ -0.43
KNTC1-208ENST00000535410 CAPN9O14815 690 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 THAP12O43422 761 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 LETM1O95202 739 aaPredicted RBP12.39□□□□□ -0.43
KNTC1-208ENST00000535410 CAVIN2O95810 425 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 TPM2P07951 284 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 GNA15P30679 374 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 MPLP40238 635 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 USP8P40818 1118 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 GPD2P43304 727 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 RGS7P49802 495 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 CREB5Q02930 508 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 PTK2Q05397 1052 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 MESP2Q0VG99 397 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 MTA1Q13330 715 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 MAN2A1Q16706 1144 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 MPP7Q5T2T1 576 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 IL31Q6EBC2 164 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 MSANTD2Q6P1R3 559 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 TMEM92Q6UXU6 159 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 ANKS1BQ7Z6G8 1248 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 FAM217AQ8IXS0 508 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 OLIG1Q8TAK6 271 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 ZNF606Q8WXB4 792 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 BHMTQ93088 406 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 AZIN2Q96A70 460 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 KREMEN1Q96MU8 473 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 SERPINB11Q96P15 392 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 NOX5Q96PH1 765 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 TPSD1Q9BZJ3 242 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 TMEM51Q9NW97 253 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 PLK2Q9NYY3 685 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 SFMBT1Q9UHJ3 866 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 STOML2Q9UJZ1 356 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 CEP83Q9Y592 693 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.39□□□□□ -0.43
KNTC1-208ENST00000535410 DMDP11532 3685 aa12.39□□□□□ -0.43
KNTC1-208ENST00000535410 ATG2BQ96BY7 2078 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 BCLAF3A2AJT9 711 aaKnown RBP12.38□□□□□ -0.43
KNTC1-208ENST00000535410 SLC30A4O14863 429 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 AP5Z1O43299 807 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 SYNCRIPO60506 623 aaKnown RBP12.38□□□□□ -0.43
KNTC1-208ENST00000535410 ADAM23O75077 832 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 NCAM1P13591 858 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 P2RY2P41231 377 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 RPL34P49207 117 aaKnown RBP12.38□□□□□ -0.43
KNTC1-208ENST00000535410 LIMK1P53667 647 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 ATXN1P54253 815 aaKnown RBP12.38□□□□□ -0.43
KNTC1-208ENST00000535410 TBX4P57082 545 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 NNTQ13423 1086 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 PLA2G2CQ5R387 149 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 FYB2Q5VWT5 728 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 PMS2CLQ68D20 193 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 BHLHA9Q7RTU4 235 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 CYP2U1Q7Z449 544 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 RABEPKQ7Z6M1 372 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 SFTPA1Q8IWL2 248 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 SCUBE3Q8IX30 993 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 WFIKKN2Q8TEU8 576 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 NDRG1Q92597 394 aaKnown RBP12.38□□□□□ -0.43
KNTC1-208ENST00000535410 FAM149B1Q96BN6 582 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 GABRG3Q99928 467 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 MIS12Q9H081 205 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 NDST4Q9H3R1 872 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 SLC12A6Q9UHW9 1150 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 PLA2G4CQ9UP65 541 aa12.38□□□□□ -0.43
KNTC1-208ENST00000535410 FRYLO94915 3013 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 PRRT4C9JH25 899 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 KHNYNO15037 678 aaKnown RBP12.37□□□□□ -0.43
KNTC1-208ENST00000535410 DCLK1O15075 740 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 TRIM24O15164 1050 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 SLC2A3P11169 496 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 SLC9A1P19634 815 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 EEF1GP26641 437 aaKnown RBP12.37□□□□□ -0.43
KNTC1-208ENST00000535410 PON1P27169 355 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 HOXC13P31276 330 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 HOXD12P35452 270 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 KRT9P35527 623 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 DHPSP49366 369 aaPredicted RBP12.37□□□□□ -0.43
KNTC1-208ENST00000535410 YWHAZP63104 245 aaKnown RBP12.37□□□□□ -0.43
KNTC1-208ENST00000535410 ARHGAP44Q17R89 818 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 VWA3BQ502W6 1294 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 EGFLAMQ63HQ2 1017 aa12.37□□□□□ -0.43
KNTC1-208ENST00000535410 TMEM110Q86TL2 294 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms