RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 ZBTB16Q05516 673 aa11.31□□□□□ -0.6
VAMP1-204ENST00000535180 SERPINA13PQ6UXR4 307 aa11.31□□□□□ -0.6
VAMP1-204ENST00000535180 RUFY3Q7L099 469 aa11.31□□□□□ -0.6
VAMP1-204ENST00000535180 OXR1Q8N573 874 aa11.31□□□□□ -0.6
VAMP1-204ENST00000535180 LRRC52Q8N7C0 313 aa11.31□□□□□ -0.6
VAMP1-204ENST00000535180 RBBP8NLQ8NC74 664 aaPredicted RBP11.31□□□□□ -0.6
VAMP1-204ENST00000535180 WASF1Q92558 559 aa11.31□□□□□ -0.6
VAMP1-204ENST00000535180 PCED1BQ96HM7 432 aa11.31□□□□□ -0.6
VAMP1-204ENST00000535180 EBF2Q9HAK2 575 aa11.31□□□□□ -0.6
VAMP1-204ENST00000535180 AASDHPPTQ9NRN7 309 aa11.31□□□□□ -0.6
VAMP1-204ENST00000535180 ELOVL2Q9NXB9 296 aa11.31□□□□□ -0.6
VAMP1-204ENST00000535180 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.31□□□□□ -0.6
VAMP1-204ENST00000535180 LARSQ9P2J5 1176 aaKnown RBP11.31□□□□□ -0.6
VAMP1-204ENST00000535180 TJP2Q9UDY2 1190 aa11.31□□□□□ -0.6
VAMP1-204ENST00000535180 A0A1W2PNU3 283 aaPredicted RBP11.3□□□□□ -0.6
VAMP1-204ENST00000535180 TLR4O00206 839 aa11.3□□□□□ -0.6
VAMP1-204ENST00000535180 DTNBO60941 627 aa11.3□□□□□ -0.6
VAMP1-204ENST00000535180 RTN3O95197 1032 aaPredicted RBP11.3□□□□□ -0.6
VAMP1-204ENST00000535180 SCP2P22307 547 aa11.3□□□□□ -0.6
VAMP1-204ENST00000535180 DUSP3P51452 185 aaPredicted RBP11.3□□□□□ -0.6
VAMP1-204ENST00000535180 NXPH1P58417 271 aa11.3□□□□□ -0.6
VAMP1-204ENST00000535180 EIF4HQ15056 248 aaKnown RBP11.3□□□□□ -0.6
VAMP1-204ENST00000535180 ISXQ2M1V0 245 aa11.3□□□□□ -0.6
VAMP1-204ENST00000535180 DPH6Q7L8W6 267 aa11.3□□□□□ -0.6
VAMP1-204ENST00000535180 CLEC14AQ86T13 490 aa11.3□□□□□ -0.6
VAMP1-204ENST00000535180 NUP93Q8N1F7 819 aa11.3□□□□□ -0.6
VAMP1-204ENST00000535180 MYCBPAPQ8TBZ2 947 aa11.3□□□□□ -0.6
VAMP1-204ENST00000535180 SNX29Q8TEQ0 813 aa11.3□□□□□ -0.6
VAMP1-204ENST00000535180 BHMTQ93088 406 aa11.3□□□□□ -0.6
VAMP1-204ENST00000535180 FBXO32Q969P5 355 aa11.3□□□□□ -0.6
VAMP1-204ENST00000535180 GRAMD1AQ96CP6 724 aa11.3□□□□□ -0.6
VAMP1-204ENST00000535180 P2RY11Q96G91 374 aa11.3□□□□□ -0.6
VAMP1-204ENST00000535180 PRR11Q96HE9 360 aaPredicted RBP11.3□□□□□ -0.6
VAMP1-204ENST00000535180 PHF12Q96QT6 1004 aa11.3□□□□□ -0.6
VAMP1-204ENST00000535180 KLF16Q9BXK1 252 aaPredicted RBP11.3□□□□□ -0.6
VAMP1-204ENST00000535180 NACA2Q9H009 215 aa11.3□□□□□ -0.6
VAMP1-204ENST00000535180 TMEM30AQ9NV96 361 aa11.3□□□□□ -0.6
VAMP1-204ENST00000535180 GEMIN8Q9NWZ8 242 aaKnown RBP11.3□□□□□ -0.6
VAMP1-204ENST00000535180 PCDHGA8Q9Y5G5 932 aa11.3□□□□□ -0.6
VAMP1-204ENST00000535180 WNT9AO14904 365 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 CYP26A1O43174 497 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 IL18RAPO95256 599 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 DNTTP04053 509 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 GP1BAP07359 652 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 ZDHHC11BP0C7U3 371 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 PLCG1P19174 1290 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 ELAVL4P26378 380 aaKnown RBP11.29□□□□□ -0.6
VAMP1-204ENST00000535180 MLLT3P42568 568 aaPredicted RBP11.29□□□□□ -0.6
VAMP1-204ENST00000535180 CACNA2D1P54289 1103 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 RPS14P62263 151 aaKnown RBP11.29□□□□□ -0.6
VAMP1-204ENST00000535180 ORC2Q13416 577 aaPredicted RBP11.29□□□□□ -0.6
VAMP1-204ENST00000535180 NCAPHQ15003 741 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 SKIDA1Q1XH10 827 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 TTC31Q49AM3 519 aaPredicted RBP11.29□□□□□ -0.6
VAMP1-204ENST00000535180 SCARA3Q6AZY7 606 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 ADALQ6DHV7 355 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 KCNK18Q7Z418 384 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 LIMS2Q7Z4I7 341 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 ANKS1BQ7Z6G8 1248 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 DIS3L2Q8IYB7 885 aaKnown RBP11.29□□□□□ -0.6
VAMP1-204ENST00000535180 C1orf127Q8N9H9 656 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 CXorf38Q8TB03 319 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 ZNF564Q8TBZ8 553 aaPredicted RBP11.29□□□□□ -0.6
VAMP1-204ENST00000535180 KBTBD7Q8WVZ9 684 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 HPS3Q969F9 1004 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 PIWIL1Q96J94 861 aaKnown RBP11.29□□□□□ -0.6
VAMP1-204ENST00000535180 GZF1Q9H116 711 aaPredicted RBP11.29□□□□□ -0.6
VAMP1-204ENST00000535180 ABCG4Q9H172 646 aa11.29□□□□□ -0.6
VAMP1-204ENST00000535180 LSM7Q9UK45 103 aaKnown RBP11.29□□□□□ -0.6
VAMP1-204ENST00000535180 SCN8AQ9UQD0 1980 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 A0A1B0GVM2 712 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 TIMM44O43615 452 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 PENKP01210 267 aaPredicted RBP11.28□□□□□ -0.6
VAMP1-204ENST00000535180 PDGFRBP09619 1106 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 CKMT1AP12532 417 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 FDPSP14324 419 aaKnown RBP11.28□□□□□ -0.6
VAMP1-204ENST00000535180 CASRP41180 1078 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 TFAMQ00059 246 aaKnown RBP11.28□□□□□ -0.6
VAMP1-204ENST00000535180 ZNF174Q15697 407 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 TBR1Q16650 682 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 SLC45A4Q5BKX6 768 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 CRELD2Q6UXH1 353 aaPredicted RBP11.28□□□□□ -0.6
VAMP1-204ENST00000535180 USP30Q70CQ3 517 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 HS2ST1Q7LGA3 356 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 SPATS2Q86XZ4 545 aaKnown RBP11.28□□□□□ -0.6
VAMP1-204ENST00000535180 PTRH1Q86Y79 214 aaKnown RBP11.28□□□□□ -0.6
VAMP1-204ENST00000535180 CCDC83Q8IWF9 413 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 SLC25A45Q8N413 288 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 ARL14Q8N4G2 192 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 IGSF22Q8N9C0 903 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 SORCS1Q8WY21 1168 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 FBRSQ9HAH7 460 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 ZSWIM6Q9HCJ5 1215 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 KCND2Q9NZV8 630 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 AGO2Q9UKV8 859 aaKnown RBP11.28□□□□□ -0.6
VAMP1-204ENST00000535180 ZFHX3Q15911 3703 aa11.28□□□□□ -0.6
VAMP1-204ENST00000535180 RP1L1Q8IWN7 2480 aaPredicted RBP11.28□□□□□ -0.6
VAMP1-204ENST00000535180 NYNRINQ9P2P1 1898 aaKnown RBP11.27□□□□□ -0.6
VAMP1-204ENST00000535180 FAM47DPA6NHR8 397 aa11.27□□□□□ -0.61
VAMP1-204ENST00000535180 C10orf142B7Z368 130 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms