RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 CD101Q93033 1021 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 PPP2R3CQ969Q6 453 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 GFM2Q969S9 779 aaKnown RBP9.35□□□□□ -0.91
SF3B2-216ENST00000534765 CENPTQ96BT3 561 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 FAM167AQ96KS9 214 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 NT5C1BQ96P26 610 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 ECSITQ9BQ95 431 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 INIPQ9NRY2 104 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 HACD3Q9P035 362 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 PPARGC1AQ9UBK2 798 aaKnown RBP9.35□□□□□ -0.91
SF3B2-216ENST00000534765 CIDEBQ9UHD4 219 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 TNFSF13BQ9Y275 285 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 MAD1L1Q9Y6D9 718 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 BTNL10A8MVZ5 291 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 FBP2O00757 339 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 TNPO2O14787 897 aaKnown RBP9.34□□□□□ -0.91
SF3B2-216ENST00000534765 H2AFZP0C0S5 128 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 NELFEP18615 380 aaKnown RBP9.34□□□□□ -0.91
SF3B2-216ENST00000534765 TNFAIP3P21580 790 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 VARSP26640 1264 aaKnown RBP9.34□□□□□ -0.91
SF3B2-216ENST00000534765 HOXC8P31273 242 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 KRT81Q14533 505 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 METTL21CQ5VZV1 264 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 H2AFVQ71UI9 128 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 POU5F2Q8N7G0 328 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 ACSF2Q96CM8 615 aaPredicted RBP9.34□□□□□ -0.91
SF3B2-216ENST00000534765 MTBPQ96DY7 904 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 COQ7Q99807 217 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 NXF1Q9UBU9 619 aaKnown RBP9.34□□□□□ -0.91
SF3B2-216ENST00000534765 TMEM59LQ9UK28 342 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 MANSC4A6NHS7 340 aaPredicted RBP9.34□□□□□ -0.91
SF3B2-216ENST00000534765 DDX5P17844 614 aaKnown RBP9.34□□□□□ -0.91
SF3B2-216ENST00000534765 TKTP29401 623 aaKnown RBP9.34□□□□□ -0.91
SF3B2-216ENST00000534765 ECHS1P30084 290 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 GCNT1Q02742 428 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 AP1B1Q10567 949 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 CLEC16AQ2KHT3 1053 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 ZNF484Q5JVG2 852 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 ITPRIPL1Q6GPH6 555 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 TRNP1Q6NT89 227 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 C4orf50Q6ZRC1 276 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 PDZD8Q8NEN9 1154 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 CLPTM1LQ96KA5 538 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 FAM118BQ9BPY3 351 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 PAAF1Q9BRP4 392 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 ELOVL4Q9GZR5 314 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 LRMDAQ9H2I8 198 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 VPS37BQ9H9H4 285 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 CISHQ9NSE2 258 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 HEY2Q9UBP5 337 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 CNTN6Q9UQ52 1028 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 GPC6Q9Y625 555 aaPredicted RBP9.34□□□□□ -0.91
SF3B2-216ENST00000534765 GOLGA8RI6L899 631 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 PEX1O43933 1283 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 RNASEH1O60930 286 aaKnown RBP9.34□□□□□ -0.91
SF3B2-216ENST00000534765 ZBTB11O95625 1053 aaPredicted RBP9.34□□□□□ -0.91
SF3B2-216ENST00000534765 TMEM253P0C7T8 217 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 KITP10721 976 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 GTF2H1P32780 548 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 WDR72Q3MJ13 1102 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 CYP4A22Q5TCH4 519 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 MON1BQ7L1V2 547 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 PRUNE1Q86TP1 453 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 DGCR14Q96DF8 476 aaKnown RBP9.34□□□□□ -0.91
SF3B2-216ENST00000534765 ZFP42Q96MM3 310 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 HEPHQ9BQS7 1158 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 VPS51Q9UID3 782 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 ALG6Q9Y672 507 aa9.34□□□□□ -0.91
SF3B2-216ENST00000534765 TCRBV5S1A1TA0A578 114 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 CHRNA1P02708 482 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 COMTP21964 271 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 AMPD1P23109 780 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 SLC26A2P50443 739 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 ZNF572Q7Z3I7 529 aaPredicted RBP9.33□□□□□ -0.92
SF3B2-216ENST00000534765 ARFGAP1Q8N6T3 406 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 GSTCDQ8NEC7 633 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 NRG4Q8WWG1 115 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 C9orf72Q96LT7 481 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 NFKBIZQ9BYH8 718 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 MAGEB5Q9BZ81 275 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 THEGQ9P2T0 379 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 TET1Q8NFU7 2136 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 MGEA5O60502 916 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 C6orf222P0C671 652 aaPredicted RBP9.33□□□□□ -0.92
SF3B2-216ENST00000534765 S100A1P23297 94 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 PSEN2P49810 448 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 MFAP3P55082 362 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 YWHAGP61981 247 aaKnown RBP eCLIP9.33□□□□□ -0.92
SF3B2-216ENST00000534765 NOMO3P69849 1222 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 LRP8Q14114 963 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 FAM187BQ17R55 369 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 CCSAPQ6IQ19 270 aaPredicted RBP9.33□□□□□ -0.92
SF3B2-216ENST00000534765 DENND1BQ6P3S1 775 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 WDR49Q8IV35 697 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 SMG8Q8ND04 991 aaKnown RBP9.33□□□□□ -0.92
SF3B2-216ENST00000534765 APOL6Q9BWW8 343 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 DPEP3Q9H4B8 488 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 AGO3Q9H9G7 860 aaKnown RBP9.33□□□□□ -0.92
SF3B2-216ENST00000534765 KLHL11Q9NVR0 708 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 IL1RAPL1Q9NZN1 696 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms