RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 HOXB2P14652 356 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 CSRP1P21291 193 aaKnown RBP10.85□□□□□ -0.67
CSDE1-217ENST00000534699 EFEMP1Q12805 493 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 ORC1Q13415 861 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 AASDHQ4L235 1098 aaPredicted RBP10.85□□□□□ -0.67
CSDE1-217ENST00000534699 IL31Q6EBC2 164 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 SYT12Q8IV01 421 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 FAM186AA6NE01 2351 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 NEDD8-MDP1E9PL57 170 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 SGK1O00141 431 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 ADAM23O75077 832 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 IRF1P10914 325 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 TIE1P35590 1138 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 KDSRQ06136 332 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 ADIGQ0VDE8 80 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 DUOXA1Q1HG43 343 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 ZNF394Q53GI3 561 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 C2orf27AQ580R0 203 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 EFHC1Q5JVL4 640 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 DAB2IPQ5VWQ8 1189 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 SLC23A3Q6PIS1 610 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 FMNL3Q8IVF7 1028 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 CCDC117Q8IWD4 279 aaPredicted RBP10.84□□□□□ -0.67
CSDE1-217ENST00000534699 AHI1Q8N157 1196 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 C1orf131Q8NDD1 294 aaKnown RBP10.84□□□□□ -0.67
CSDE1-217ENST00000534699 ZNF397Q8NF99 534 aaPredicted RBP10.84□□□□□ -0.67
CSDE1-217ENST00000534699 IPO4Q8TEX9 1081 aaKnown RBP10.84□□□□□ -0.67
CSDE1-217ENST00000534699 ARID3AQ99856 593 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 ARRDC1-AS1Q9H2J1 176 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 OSGEPQ9NPF4 335 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 APEX2Q9UBZ4 518 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 SLC12A6Q9UHW9 1150 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 MUC22E2RYF6 1773 aaPredicted RBP10.84□□□□□ -0.67
CSDE1-217ENST00000534699 TM4SF5O14894 197 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 EEF1GP26641 437 aaKnown RBP10.84□□□□□ -0.67
CSDE1-217ENST00000534699 GBP1P32455 592 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 GPD2P43304 727 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 TMEM92Q6UXU6 159 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 HJURPQ8NCD3 748 aaPredicted RBP10.84□□□□□ -0.67
CSDE1-217ENST00000534699 MDGA1Q8NFP4 955 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 SHC3Q92529 594 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 C2orf42Q9NWW7 574 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 BCCIPQ9P287 314 aaKnown RBP eCLIP10.84□□□□□ -0.67
CSDE1-217ENST00000534699 THADAQ6YHU6 1953 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 MYOFQ9NZM1 2061 aa10.84□□□□□ -0.67
CSDE1-217ENST00000534699 OTOGLQ3ZCN5 2332 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 M0QYV0 167 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 ACSL4O60488 711 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 KLKB1P03952 638 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 ATP5BP06576 529 aaKnown RBP10.83□□□□□ -0.68
CSDE1-217ENST00000534699 HOXC13P31276 330 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 EXOC3L4Q17RC7 722 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 SYCP2LQ5T4T6 812 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 ARCQ7LC44 396 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 MSANTD4Q8NCY6 345 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 USP36Q9P275 1121 aaKnown RBP10.83□□□□□ -0.68
CSDE1-217ENST00000534699 CEP83Q9Y592 693 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 PAXBP1Q9Y5B6 917 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 TCRBV21S2A2A0A5A6 115 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 TBX18O95935 607 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 SRPRAP08240 638 aaKnown RBP10.83□□□□□ -0.68
CSDE1-217ENST00000534699 GABRG2P18507 467 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 ANP32AP39687 249 aaKnown RBP10.83□□□□□ -0.68
CSDE1-217ENST00000534699 SEC13P55735 322 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 TBX4P57082 545 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 PTK2Q05397 1052 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 TPD52L1Q16890 204 aaPredicted RBP10.83□□□□□ -0.68
CSDE1-217ENST00000534699 WDR45BQ5MNZ6 344 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 LYSMD4Q5XG99 296 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 KLHL10Q6JEL2 608 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 TRIM65Q6PJ69 517 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 WBP2Q969T9 261 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 TTC17Q96AE7 1141 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 TMA16Q96EY4 203 aaKnown RBP10.83□□□□□ -0.68
CSDE1-217ENST00000534699 SLC39A13Q96H72 371 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 KREMEN1Q96MU8 473 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 NUSAP1Q9BXS6 441 aaKnown RBP10.83□□□□□ -0.68
CSDE1-217ENST00000534699 ITM2CQ9NQX7 267 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 ELOVL2Q9NXB9 296 aa10.83□□□□□ -0.68
CSDE1-217ENST00000534699 MAP3K13O43283 966 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 GADD45BO75293 160 aaPredicted RBP10.82□□□□□ -0.68
CSDE1-217ENST00000534699 TPM2P07951 284 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 SYPP08247 313 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 PGFP49763 221 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 CDR1P51861 262 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 ZNF677Q86XU0 584 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 MIB1Q86YT6 1006 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 CCDC33Q8N5R6 958 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 ATP6V0D2Q8N8Y2 350 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 FIBINQ8TAL6 211 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 TFAP2BQ92481 460 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 ZNF419Q96HQ0 510 aaPredicted RBP10.82□□□□□ -0.68
CSDE1-217ENST00000534699 LSM14BQ9BX40 385 aaKnown RBP10.82□□□□□ -0.68
CSDE1-217ENST00000534699 POPDC2Q9HBU9 364 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 UBE2TQ9NPD8 197 aaPredicted RBP10.82□□□□□ -0.68
CSDE1-217ENST00000534699 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.82□□□□□ -0.68
CSDE1-217ENST00000534699 SLC6A14Q9UN76 642 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 STON1Q9Y6Q2 735 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 A0A1W2PQF6 199 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 TARSL2A2RTX5 802 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms