RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 CCR1P32246 355 aa17.71■□□□□ 0.43
PHRF1-206ENST00000534320 PRAMEF19Q5SWL8 479 aa17.71■□□□□ 0.43
PHRF1-206ENST00000534320 KCNK16Q96T55 309 aa17.71■□□□□ 0.43
PHRF1-206ENST00000534320 CEP41Q9BYV8 373 aa17.71■□□□□ 0.43
PHRF1-206ENST00000534320 KANSL3Q9P2N6 904 aa17.71■□□□□ 0.43
PHRF1-206ENST00000534320 MKL2Q9ULH7 1088 aa17.71■□□□□ 0.43
PHRF1-206ENST00000534320 SLC12A8A0AV02 714 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 BMPR2Q13873 1038 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 HSDL1Q3SXM5 330 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 GAD1Q99259 594 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 LRRC19Q9H756 370 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 LATS2Q9NRM7 1088 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 C2CD2Q9Y426 696 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 ZSCAN5DPP0CG00 497 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 TARSP26639 723 aaKnown RBP17.7■□□□□ 0.42
PHRF1-206ENST00000534320 IFNA8P32881 189 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 C15orf59Q2T9L4 293 aaPredicted RBP17.7■□□□□ 0.42
PHRF1-206ENST00000534320 ATP13A4Q4VNC1 1196 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 STRA8Q7Z7C7 330 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 LZICQ8WZA0 190 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 DYRK4Q9NR20 520 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 SETD1AO15047 1707 aaKnown RBP17.7■□□□□ 0.42
PHRF1-206ENST00000534320 O00370 1275 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 MGAT5Q09328 741 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 CAPRIN1Q14444 709 aaKnown RBP17.7■□□□□ 0.42
PHRF1-206ENST00000534320 TMA16Q96EY4 203 aaKnown RBP17.7■□□□□ 0.42
PHRF1-206ENST00000534320 GPR20Q99678 358 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 FICDQ9BVA6 458 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 UBE2OQ9C0C9 1292 aaKnown RBP17.7■□□□□ 0.42
PHRF1-206ENST00000534320 DMAP1Q9NPF5 467 aaPredicted RBP17.7■□□□□ 0.42
PHRF1-206ENST00000534320 PDGFCQ9NRA1 345 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 LRP6O75581 1613 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 UMODL1Q5DID0 1318 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 MAGEA13PA6NCF6 341 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 RHOBTB1O94844 696 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 ZNF143P52747 638 aaPredicted RBP17.7■□□□□ 0.42
PHRF1-206ENST00000534320 SLC35G1Q2M3R5 365 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 ZRANB3Q5FWF4 1079 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 PTRHD1Q6GMV3 140 aaKnown RBP17.7■□□□□ 0.42
PHRF1-206ENST00000534320 KCNT2Q6UVM3 1135 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 MREGQ8N565 214 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 ADAM32Q8TC27 787 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 MRGBPQ9NV56 204 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 BLOC1S6Q9UL45 172 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 VANGL2Q9ULK5 521 aa17.7■□□□□ 0.42
PHRF1-206ENST00000534320 AIM2O14862 343 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 HIST1H2AGP0C0S8 130 aaPredicted RBP17.69■□□□□ 0.42
PHRF1-206ENST00000534320 HIST1H2ADP20671 130 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 AVPR1AP37288 418 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 CPA2P48052 419 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 RAB14P61106 215 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 PLD3Q8IV08 490 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 UNC45BQ8IWX7 931 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 PPP1R13LQ8WUF5 828 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 CELF6Q96J87 481 aaKnown RBP17.69■□□□□ 0.42
PHRF1-206ENST00000534320 HIST1H2AHQ96KK5 128 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 SENP8Q96LD8 212 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 PCDHB18PQ96TA0 734 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 HIST1H2AJQ99878 128 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 H2AFJQ9BTM1 129 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 ILKAPQ9H0C8 392 aaPredicted RBP17.69■□□□□ 0.42
PHRF1-206ENST00000534320 POPDC2Q9HBU9 364 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 SYBUQ9NX95 663 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 UBP1Q9NZI7 540 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 LOC100653049A0A140TA62 436 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.69■□□□□ 0.42
PHRF1-206ENST00000534320 STX7O15400 261 aaKnown RBP17.69■□□□□ 0.42
PHRF1-206ENST00000534320 KRT34O76011 436 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 TMCC1O94876 653 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 EGFRP00533 1210 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 CDH18Q13634 790 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 DPYSL3Q14195 570 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 PCBP1Q15365 356 aaKnown RBP eCLIP17.69■□□□□ 0.42
PHRF1-206ENST00000534320 TTMPQ5BVD1 217 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 NAIF1Q69YI7 327 aaPredicted RBP17.69■□□□□ 0.42
PHRF1-206ENST00000534320 MRNIPQ6NTE8 343 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 APBB2Q92870 758 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 TMEM106CQ9BVX2 250 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 TEX12Q9BXU0 123 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 COG4Q9H9E3 785 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 CD274Q9NZQ7 290 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 SAE1Q9UBE0 346 aaPredicted RBP17.69■□□□□ 0.42
PHRF1-206ENST00000534320 KLRG2A4D1S0 409 aaPredicted RBP17.69■□□□□ 0.42
PHRF1-206ENST00000534320 SPDYE5A6NIY4 337 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 USP2O75604 605 aaPredicted RBP17.69■□□□□ 0.42
PHRF1-206ENST00000534320 ALDH2P05091 517 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 KPNB1Q14974 876 aaKnown RBP17.69■□□□□ 0.42
PHRF1-206ENST00000534320 TMEM86AQ8N2M4 240 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 SLC13A4Q9UKG4 626 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 PKP3Q9Y446 797 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 DCDC2CA8MYV0 355 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 AKT1P31749 480 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 ZNF280AP59817 542 aaPredicted RBP17.69■□□□□ 0.42
PHRF1-206ENST00000534320 RPL7AP62424 266 aaKnown RBP17.69■□□□□ 0.42
PHRF1-206ENST00000534320 AGAP9Q5VTM2 703 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 C16orf89Q6UX73 402 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 FAM183BPQ6ZVS7 135 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 HDDC2Q7Z4H3 204 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 ALG3Q92685 438 aa17.69■□□□□ 0.42
PHRF1-206ENST00000534320 PBXIP1Q96AQ6 731 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms