RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 TRMT61BQ9BVS5 477 aaKnown RBP13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 DEF6Q9H4E7 631 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 SORCS3Q9UPU3 1222 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 ANKRD62A6NC57 917 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 CHADO15335 359 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 ENDOD1O94919 500 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 IRF1P10914 325 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 GPC5P78333 572 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 OGDHQ02218 1023 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 RING1Q06587 406 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 SLC25A52Q3SY17 297 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 CCDC14Q49A88 953 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 ARHGAP29Q52LW3 1261 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 OSCP1Q8WVF1 389 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 PLD4Q96BZ4 506 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 ARHGEF26Q96DR7 871 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 ZFYVE19Q96K21 471 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 SERPINB11Q96P15 392 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 TBCBQ99426 244 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 BAG1Q99933 345 aaPredicted RBP13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 LINC00597Q9H2U6 94 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 SLC2A4RGQ9NR83 387 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 PARVAQ9NVD7 372 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 RRN3Q9NYV6 651 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 MUTYHQ9UIF7 546 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 DUSP12Q9UNI6 340 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 TLR6Q9Y2C9 796 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 TMEM191CA6NGB0 347 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 SCAMP3O14828 347 aaKnown RBP13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 HMBSP08397 361 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 SRFP11831 508 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 ABCB4P21439 1286 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 GDI1P31150 447 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 PTPN9P43378 593 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 KPNA1P52294 538 aaPredicted RBP13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 TBX4P57082 545 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 CENPIQ92674 756 aaPredicted RBP13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 CFAP57Q96MR6 1250 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 TRPV5Q9NQA5 729 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 HPS4Q9NQG7 708 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 WNT6Q9Y6F9 365 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 EPN1Q9Y6I3 576 aaPredicted RBP13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 EIF3CLB5ME19 914 aaKnown RBP13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 M0QYT0 321 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 PDGFRAP16234 1089 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 EML3Q32P44 896 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 RAB6CQ53S08 254 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 TRIM68Q6AZZ1 485 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 BBS7Q8IWZ6 715 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 MCEEQ96PE7 176 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 EIF3CQ99613 913 aaKnown RBP13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 TRIM7Q9C029 511 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 RAB6CQ9H0N0 254 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 PIGVQ9NUD9 493 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 THG1LQ9NWX6 298 aaKnown RBP13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 MYO1AQ9UBC5 1043 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 STOML2Q9UJZ1 356 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 AGO1Q9UL18 857 aaKnown RBP13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 STAP1Q9ULZ2 295 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 REXO2Q9Y3B8 237 aaKnown RBP13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 SH3BP1Q9Y3L3 701 aa13.24□□□□□ -0.29
RPUSD4-208ENST00000533628 OTOL1A6NHN0 477 aaPredicted RBP13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 KCNU1A8MYU2 1149 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 GFRA2O00451 464 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 NDUFA10O95299 355 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 H2AFZP0C0S5 128 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 TMEM253P0C7T8 217 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 ARSAP15289 507 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 GPD1P21695 349 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 CORO1AP31146 461 aaKnown RBP13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 CXCR3P49682 368 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 SULT1E1P49888 294 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 ZNF143P52747 638 aaPredicted RBP13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 ZNF252P-AS1Q0IIN9 211 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 C15orf59Q2T9L4 293 aaPredicted RBP13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 IER5LQ5T953 404 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 SH3PXD2AQ5TCZ1 1133 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 H2AFVQ71UI9 128 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 FAM217AQ8IXS0 508 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 ADGRG2Q8IZP9 1017 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 AZIN2Q96A70 460 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 DCLK3Q9C098 648 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 KCNF1Q9H3M0 494 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 DDIT4Q9NX09 232 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 DUS2Q9NX74 493 aaKnown RBP13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 INTUQ9ULD6 942 aa13.23□□□□□ -0.29
RPUSD4-208ENST00000533628 VCANP13611 3396 aa13.22□□□□□ -0.29
RPUSD4-208ENST00000533628 ERICH4A6NGS2 130 aa13.22□□□□□ -0.29
RPUSD4-208ENST00000533628 I6L893 689 aaPredicted RBP13.22□□□□□ -0.29
RPUSD4-208ENST00000533628 CYLC1P35663 651 aaPredicted RBP13.22□□□□□ -0.29
RPUSD4-208ENST00000533628 ATXN1P54253 815 aaKnown RBP13.22□□□□□ -0.29
RPUSD4-208ENST00000533628 TNK2Q07912 1038 aa13.22□□□□□ -0.29
RPUSD4-208ENST00000533628 PDGFRLQ15198 375 aa13.22□□□□□ -0.29
RPUSD4-208ENST00000533628 ZC3H12AQ5D1E8 599 aaKnown RBP13.22□□□□□ -0.29
RPUSD4-208ENST00000533628 C10orf76Q5T2E6 689 aa13.22□□□□□ -0.29
RPUSD4-208ENST00000533628 LRRC8AQ8IWT6 810 aa13.22□□□□□ -0.29
RPUSD4-208ENST00000533628 YAF2Q8IY57 180 aa13.22□□□□□ -0.29
RPUSD4-208ENST00000533628 TTC16Q8NEE8 873 aa13.22□□□□□ -0.29
RPUSD4-208ENST00000533628 FNIP1Q8TF40 1166 aa13.22□□□□□ -0.29
RPUSD4-208ENST00000533628 P2RY11Q96G91 374 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms