RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 HDAC4P56524 1084 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 CDK16Q00536 496 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 ASTE1Q2TB18 679 aaPredicted RBP15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 ZRANB3Q5FWF4 1079 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 SEL1L3Q68CR1 1132 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 EFL1Q7Z2Z2 1120 aaKnown RBP15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 GANCQ8TET4 914 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 SENP8Q96LD8 212 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 ULBP1Q9BZM6 244 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 GGA2Q9UJY4 613 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 ZNF197O14709 1029 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 MYO1DO94832 1006 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 FSBPO95073 299 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 ATXN3P54252 364 aaPredicted RBP15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 ZNF177Q13360 481 aaPredicted RBP15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 PLEKHA7Q6IQ23 1121 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 WNT8BQ93098 351 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 FAR2Q96K12 515 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 FHDC1Q9C0D6 1143 aaPredicted RBP15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 SIX2Q9NPC8 291 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 RNF19AQ9NV58 838 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 PIH1D1Q9NWS0 290 aaKnown RBP15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 UMODL1Q5DID0 1318 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 B4GALT4O60513 344 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 C4BPAP04003 597 aaKnown RBP15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 ALADP13716 330 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 KCNA3P22001 575 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 MRPS35P82673 323 aaKnown RBP15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 KRT33BQ14525 404 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 MTFR1Q15390 333 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 FSCN1Q16658 493 aaKnown RBP15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 ZNF280DQ6N043 979 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 FAM117BQ6P1L5 589 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 GAD1Q99259 594 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 ASPSCR1Q9BZE9 553 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 PRDM16Q9HAZ2 1276 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 TAGLN3Q9UI15 199 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 ARHGAP10A1A4S6 786 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 MANSC4A6NHS7 340 aaPredicted RBP15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 PFDN1O60925 122 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 ALDH1A1P00352 501 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 FLOT2Q14254 428 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 NPNTQ6UXI9 565 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 EXOC3L1Q86VI1 746 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 SCUBE1Q8IWY4 988 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 PIDD1Q9HB75 910 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 NCKIPSDQ9NZQ3 722 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 PKP3Q9Y446 797 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 PCDHA2Q9Y5H9 948 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 LRP6O75581 1613 aa15.74■□□□□ 0.11
PCDHA3-202ENST00000532566 SLC12A8A0AV02 714 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 PTPN7P35236 360 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 POU6F1Q14863 301 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 PCBP1Q15365 356 aaKnown RBP eCLIP15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 TMEM86AQ8N2M4 240 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 PWWP2AQ96N64 755 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 GPR20Q99678 358 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 MAF1Q9H063 256 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 NT5MQ9NPB1 228 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 PCDHB8Q9UN66 801 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 KLRG2A4D1S0 409 aaPredicted RBP15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 SLCO1B7G3V0H7 640 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 H7C4K7 107 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 DNAJC8O75937 253 aaPredicted RBP15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 SERPINE1P05121 402 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 YBX3P16989 372 aaKnown RBP eCLIP15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 ARF4P18085 180 aaPredicted RBP15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 ZNF135P52742 658 aaPredicted RBP15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 ITGA9Q13797 1035 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 KCTD19Q17RG1 926 aaPredicted RBP15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 MOB2Q70IA6 237 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 LZTR1Q8N653 840 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 SOCS4Q8WXH5 440 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 VAT1Q99536 393 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 NIFKQ9BYG3 293 aaKnown RBP15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 ELOVL4Q9GZR5 314 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 C2orf81A6NN90 581 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 PHLPP1O60346 1717 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 SOAT2O75908 522 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 PTPN1P18031 435 aaKnown RBP15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 SPANXN3Q5MJ09 141 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 TMEM169Q96HH4 297 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 YY1AP1Q9H869 796 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 RIC8BQ9NVN3 520 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 THAP1Q9NVV9 213 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 GID8Q9NWU2 228 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 WARS2Q9UGM6 360 aaKnown RBP15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 SH3BP1Q9Y3L3 701 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 TRPV2Q9Y5S1 764 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 TMEM247A6NEH6 219 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 FCHO1O14526 889 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 AKAP10O43572 662 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 RPA3P35244 121 aaPredicted RBP15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 NPY2RP49146 381 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 PTPN20Q4JDL3 420 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 GRTP1Q5TC63 336 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 TMCO4Q5TGY1 634 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 MARC1Q5VT66 337 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 LAYNQ6UX15 382 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms