RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 ACVRL1P37023 503 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 GSTM5P46439 218 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 RBM5P52756 815 aaKnown RBP eCLIP3.35□□□□□ -1.87
CD44-234ENST00000531873 CASP6P55212 293 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 FOXL2P58012 376 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 RPL15P61313 204 aaKnown RBP3.35□□□□□ -1.87
CD44-234ENST00000531873 ITIH3Q06033 890 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 GALNT2Q10471 571 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 TP53BP2Q13625 1128 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 SF3B3Q15393 1217 aaKnown RBP3.35□□□□□ -1.87
CD44-234ENST00000531873 ST3GAL2Q16842 350 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 SPDYE7PQ495Y7 208 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 TREML2Q5T2D2 321 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 ANO7Q6IWH7 933 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 ACAD10Q6JQN1 1059 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 ARMC6Q6NXE6 501 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 CFAP161Q6P656 301 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 VWA1Q6PCB0 445 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 C16orf54Q6UWD8 224 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 TCP11L2Q8N4U5 519 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 TTC9BQ8N6N2 239 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 FAM71DQ8N9W8 422 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 ANKRD52Q8NB46 1076 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 B3GALNT2Q8NCR0 500 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 IL17DQ8TAD2 202 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 ADAMTS18Q8TE60 1221 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 ASB10Q8WXI3 467 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 RFFLQ8WZ73 363 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 OVCA2Q8WZ82 227 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 FKBP10Q96AY3 582 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 MYEOVQ96EZ4 313 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 TRMT61AQ96FX7 289 aaKnown RBP3.35□□□□□ -1.87
CD44-234ENST00000531873 PRR11Q96HE9 360 aaPredicted RBP3.35□□□□□ -1.87
CD44-234ENST00000531873 REXO5Q96IC2 774 aaKnown RBP3.35□□□□□ -1.87
CD44-234ENST00000531873 CHCHD6Q9BRQ6 235 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 WDR26Q9H7D7 661 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 SAP30LQ9HAJ7 183 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 IL21RQ9HBE5 538 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 TBC1D22BQ9NU19 505 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 DKK3Q9UBP4 350 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 NKX1-2Q9UD57 310 aaPredicted RBP3.35□□□□□ -1.87
CD44-234ENST00000531873 AASSQ9UDR5 926 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 ST6GALNAC2Q9UJ37 374 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 FBXO2Q9UK22 296 aaPredicted RBP3.35□□□□□ -1.87
CD44-234ENST00000531873 RAB21Q9UL25 225 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 TRPC5Q9UL62 973 aaPredicted RBP3.35□□□□□ -1.87
CD44-234ENST00000531873 ARHGAP26Q9UNA1 814 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 LMTK3Q96Q04 1460 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 A0A087X0M5 115 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 A0A1B0GX30 115 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 A0A1W2PPH5 198 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 DYTNA2CJ06 578 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 AGAP5A6NIR3 686 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 F5H0A9 414 aaPredicted RBP3.34□□□□□ -1.87
CD44-234ENST00000531873 NKX2-8O15522 239 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 TSPAN3O60637 253 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 RTN3O95197 1032 aaPredicted RBP3.34□□□□□ -1.87
CD44-234ENST00000531873 MBPP02686 304 aaPredicted RBP3.34□□□□□ -1.87
CD44-234ENST00000531873 CTGFP29279 349 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 GDF5P43026 501 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 SELENOPP49908 381 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 DGKQP52824 942 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 IRX6P78412 446 aaPredicted RBP3.34□□□□□ -1.87
CD44-234ENST00000531873 RNASELQ05823 741 aaKnown RBP3.34□□□□□ -1.87
CD44-234ENST00000531873 BFSP2Q13515 415 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 TBCCQ15814 346 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 TSTQ16762 297 aaKnown RBP3.34□□□□□ -1.87
CD44-234ENST00000531873 FAM187BQ17R55 369 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 SLC45A4Q5BKX6 768 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 WDR45BQ5MNZ6 344 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 ZNF618Q5T7W0 954 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 CCDC30Q5VVM6 783 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 ANKRD40Q6AI12 368 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 ZNF585AQ6P3V2 769 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 KIAA1324Q6UXG2 1013 aaKnown RBP3.34□□□□□ -1.87
CD44-234ENST00000531873 RINLQ6ZS11 566 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 NEK10Q6ZWH5 1172 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 H1FNTQ75WM6 255 aaPredicted RBP3.34□□□□□ -1.87
CD44-234ENST00000531873 KRT27Q7Z3Y8 459 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 ZNF276Q8N554 614 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 PTGR2Q8N8N7 351 aaPredicted RBP3.34□□□□□ -1.87
CD44-234ENST00000531873 LSM14AQ8ND56 463 aaKnown RBP3.34□□□□□ -1.87
CD44-234ENST00000531873 CLEC4CQ8WTT0 213 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 UCMAQ8WVF2 138 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 RFKQ969G6 155 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 RNF125Q96EQ8 232 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 C7orf26Q96N11 449 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 NEUROD6Q96NK8 337 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 BARD1Q99728 777 aaKnown RBP3.34□□□□□ -1.87
CD44-234ENST00000531873 ACAD9Q9H845 621 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 OLA1Q9NTK5 396 aaKnown RBP3.34□□□□□ -1.87
CD44-234ENST00000531873 FBXO28Q9NVF7 368 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 TMLHEQ9NVH6 421 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 CNPY2Q9Y2B0 182 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 SLC45A1Q9Y2W3 748 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 PCDHB2Q9Y5E7 798 aa3.34□□□□□ -1.87
CD44-234ENST00000531873 CENPVL1A0A0U1RR11 272 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 PGPEP1LA6NFU8 196 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 SAC3D1A6NKF1 404 aa3.33□□□□□ -1.88
CD44-234ENST00000531873 PLSCR1O15162 318 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms