RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 SLC7A9P82251 487 aa18.36■□□□□ 0.53
CTSB-222ENST00000531551 ACAP1Q15027 740 aa18.36■□□□□ 0.53
CTSB-222ENST00000531551 TRIP4Q15650 581 aaPredicted RBP18.36■□□□□ 0.53
CTSB-222ENST00000531551 C11orf63Q6NUN7 778 aa18.36■□□□□ 0.53
CTSB-222ENST00000531551 SYCE1Q8N0S2 351 aa18.36■□□□□ 0.53
CTSB-222ENST00000531551 ARFGAP1Q8N6T3 406 aa18.36■□□□□ 0.53
CTSB-222ENST00000531551 PGAP3Q96FM1 320 aaPredicted RBP18.36■□□□□ 0.53
CTSB-222ENST00000531551 MYADMQ96S97 322 aa18.36■□□□□ 0.53
CTSB-222ENST00000531551 KLF16Q9BXK1 252 aaPredicted RBP18.36■□□□□ 0.53
CTSB-222ENST00000531551 ZWILCHQ9H900 591 aa18.36■□□□□ 0.53
CTSB-222ENST00000531551 PRDM6Q9NQX0 595 aa18.36■□□□□ 0.53
CTSB-222ENST00000531551 CCL26Q9Y258 94 aa18.36■□□□□ 0.53
CTSB-222ENST00000531551 DOCK6Q96HP0 2047 aa18.36■□□□□ 0.53
CTSB-222ENST00000531551 SCAMP3O14828 347 aaKnown RBP18.35■□□□□ 0.53
CTSB-222ENST00000531551 PRPSAP2O60256 369 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 ENDOD1O94919 500 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 FTCDO95954 541 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 TCF4P15884 667 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 MSNP26038 577 aaKnown RBP18.35■□□□□ 0.53
CTSB-222ENST00000531551 CCR1P32246 355 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 KPNA1P52294 538 aaPredicted RBP18.35■□□□□ 0.53
CTSB-222ENST00000531551 ZNF569Q5MCW4 686 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 KCND1Q9NSA2 647 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 TDP1Q9NUW8 608 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 GDE1Q9NZC3 331 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 HBS1LQ9Y450 684 aaKnown RBP18.35■□□□□ 0.53
CTSB-222ENST00000531551 C2orf16Q68DN1 1984 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 SOBPA7XYQ1 873 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 PRAMEF12O95522 483 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 MAN1A1P33908 653 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 SLC1A1P43005 524 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 ZXDBP98169 803 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 TFF2Q03403 129 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 ZFYVE27Q5T4F4 411 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 PEX26Q7Z412 305 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 BNIPLQ7Z465 357 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 ZSCAN30Q86W11 494 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 LRRC57Q8N9N7 239 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 TRIM58Q8NG06 486 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 USP13Q92995 863 aaPredicted RBP18.35■□□□□ 0.53
CTSB-222ENST00000531551 ZFRQ96KR1 1074 aaKnown RBP18.35■□□□□ 0.53
CTSB-222ENST00000531551 TKTL2Q9H0I9 626 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.35■□□□□ 0.53
CTSB-222ENST00000531551 USP18Q9UMW8 372 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 ARHGAP26Q9UNA1 814 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 SH3BP1Q9Y3L3 701 aa18.35■□□□□ 0.53
CTSB-222ENST00000531551 LEFTY2O00292 366 aa18.34■□□□□ 0.53
CTSB-222ENST00000531551 APOEP02649 317 aa18.34■□□□□ 0.53
CTSB-222ENST00000531551 PCK1P35558 622 aa18.34■□□□□ 0.53
CTSB-222ENST00000531551 HARS2P49590 506 aaKnown RBP18.34■□□□□ 0.53
CTSB-222ENST00000531551 CXCR3P49682 368 aa18.34■□□□□ 0.53
CTSB-222ENST00000531551 TAS2R40P59535 323 aa18.34■□□□□ 0.53
CTSB-222ENST00000531551 HADHQ16836 314 aaKnown RBP18.34■□□□□ 0.53
CTSB-222ENST00000531551 SMTNL2Q2TAL5 461 aa18.34■□□□□ 0.53
CTSB-222ENST00000531551 KCNT1Q5JUK3 1230 aa18.34■□□□□ 0.53
CTSB-222ENST00000531551 FAM78AQ5JUQ0 283 aa18.34■□□□□ 0.53
CTSB-222ENST00000531551 CCDC185Q8N715 623 aa18.34■□□□□ 0.53
CTSB-222ENST00000531551 SH3RF2Q8TEC5 729 aa18.34■□□□□ 0.53
CTSB-222ENST00000531551 FCRL2Q96LA5 508 aaPredicted RBP18.34■□□□□ 0.53
CTSB-222ENST00000531551 NCAPGQ9BPX3 1015 aa18.34■□□□□ 0.53
CTSB-222ENST00000531551 TMPRSS4Q9NRS4 437 aa18.34■□□□□ 0.53
CTSB-222ENST00000531551 CFAP97Q9P2B7 532 aa18.34■□□□□ 0.53
CTSB-222ENST00000531551 AMFRQ9UKV5 643 aa18.34■□□□□ 0.53
CTSB-222ENST00000531551 NOTCH4Q99466 2003 aa18.34■□□□□ 0.53
CTSB-222ENST00000531551 STC2O76061 302 aa18.33■□□□□ 0.53
CTSB-222ENST00000531551 VIPR2P41587 438 aa18.33■□□□□ 0.53
CTSB-222ENST00000531551 DNA2P51530 1060 aa18.33■□□□□ 0.53
CTSB-222ENST00000531551 GNG11P61952 73 aa18.33■□□□□ 0.53
CTSB-222ENST00000531551 NNTQ13423 1086 aa18.33■□□□□ 0.53
CTSB-222ENST00000531551 EIF4EBP2Q13542 120 aaPredicted RBP18.33■□□□□ 0.53
CTSB-222ENST00000531551 ARL13BQ3SXY8 428 aa18.33■□□□□ 0.53
CTSB-222ENST00000531551 LEXMQ3ZCV2 418 aa18.33■□□□□ 0.53
CTSB-222ENST00000531551 PTCRAQ6ISU1 281 aaPredicted RBP18.33■□□□□ 0.53
CTSB-222ENST00000531551 SMARCD2Q92925 531 aa18.33■□□□□ 0.53
CTSB-222ENST00000531551 WBP2Q969T9 261 aa18.33■□□□□ 0.53
CTSB-222ENST00000531551 PLD4Q96BZ4 506 aa18.33■□□□□ 0.53
CTSB-222ENST00000531551 SLC39A13Q96H72 371 aa18.33■□□□□ 0.53
CTSB-222ENST00000531551 ASB16Q96NS5 453 aa18.33■□□□□ 0.53
CTSB-222ENST00000531551 SLC12A6Q9UHW9 1150 aa18.33■□□□□ 0.53
CTSB-222ENST00000531551 PACSIN2Q9UNF0 486 aaPredicted RBP18.33■□□□□ 0.53
CTSB-222ENST00000531551 SLC2A3P11169 496 aa18.33■□□□□ 0.52
CTSB-222ENST00000531551 IL1R2P27930 398 aa18.33■□□□□ 0.52
CTSB-222ENST00000531551 CORO1AP31146 461 aaKnown RBP18.33■□□□□ 0.52
CTSB-222ENST00000531551 NUGGCQ68CJ6 796 aa18.33■□□□□ 0.52
CTSB-222ENST00000531551 OTOP3Q7RTS5 596 aa18.33■□□□□ 0.52
CTSB-222ENST00000531551 SLFN11Q7Z7L1 901 aa18.33■□□□□ 0.52
CTSB-222ENST00000531551 DENND1CQ8IV53 801 aa18.33■□□□□ 0.52
CTSB-222ENST00000531551 UNC45BQ8IWX7 931 aa18.33■□□□□ 0.52
CTSB-222ENST00000531551 SLC35F6Q8N357 371 aa18.33■□□□□ 0.52
CTSB-222ENST00000531551 HSPH1Q92598 858 aa18.33■□□□□ 0.52
CTSB-222ENST00000531551 ACSF2Q96CM8 615 aaPredicted RBP18.33■□□□□ 0.52
CTSB-222ENST00000531551 PEBP4Q96S96 227 aa18.33■□□□□ 0.52
CTSB-222ENST00000531551 ANLNQ9NQW6 1124 aa18.33■□□□□ 0.52
CTSB-222ENST00000531551 GPATCH2LQ9NWQ4 482 aa18.33■□□□□ 0.52
CTSB-222ENST00000531551 LSM7Q9UK45 103 aaKnown RBP18.33■□□□□ 0.52
CTSB-222ENST00000531551 LAMP2P13473 410 aa18.32■□□□□ 0.52
CTSB-222ENST00000531551 RING1Q06587 406 aa18.32■□□□□ 0.52
CTSB-222ENST00000531551 PPP2R5DQ14738 602 aa18.32■□□□□ 0.52
CTSB-222ENST00000531551 BRMS1LQ5PSV4 323 aa18.32■□□□□ 0.52
CTSB-222ENST00000531551 TXNRD3NBQ6F5E7 133 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms