RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 NCKIPSDQ9NZQ3 722 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 CORO1CQ9ULV4 474 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-223ENST00000529986 ACOT9Q9Y305 439 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 P4HA2O15460 535 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 IDH3BO43837 385 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 AKAP3O75969 853 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 UPP2O95045 317 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 SERPINE1P05121 402 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 RAP1GAPP47736 663 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 CAPZA2P47755 286 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 TBX2Q13207 712 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-223ENST00000529986 MPP3Q13368 585 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 BOLA3Q53S33 107 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 SMIM5Q71RC9 77 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 ARHGEF19Q8IW93 802 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 BDH2Q9BUT1 245 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 ACAD9Q9H845 621 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 SAR1AQ9NR31 198 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 THAP1Q9NVV9 213 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 ZNF624Q9P2J8 865 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-223ENST00000529986 GOLGA8TH3BQL2 631 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 ECE2O60344 883 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 NDUFB10O96000 172 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 ANPEPP15144 967 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 MAGP20916 626 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 AKR1D1P51857 326 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 QPCTQ16769 361 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 GPR107Q5VW38 600 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 NACC2Q96BF6 587 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 MASTLQ96GX5 879 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 LRRC40Q9H9A6 602 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 KLHL1Q9NR64 748 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 LRRC4BQ9NT99 713 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 SNX8Q9Y5X2 465 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 WDR27A2RRH5 827 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 KIAA0391O15091 583 aaKnown RBP7.83□□□□□ -1.16
CTNND1-223ENST00000529986 STX7O15400 261 aaKnown RBP7.83□□□□□ -1.16
CTNND1-223ENST00000529986 KATNA1O75449 491 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 PROSCO94903 275 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 SEMA3DO95025 777 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 ZSCAN5DPP0CG00 497 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 DDX5P17844 614 aaKnown RBP7.83□□□□□ -1.16
CTNND1-223ENST00000529986 HK2P52789 917 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 SLC5A9Q2M3M2 681 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 C4orf22Q6V702 233 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 POLNQ7Z5Q5 900 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 PTAR1Q7Z6K3 402 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-223ENST00000529986 YTHDF3Q7Z739 585 aaKnown RBP7.83□□□□□ -1.16
CTNND1-223ENST00000529986 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.83□□□□□ -1.16
CTNND1-223ENST00000529986 RBM46Q8TBY0 533 aaKnown RBP7.83□□□□□ -1.16
CTNND1-223ENST00000529986 SPPL2AQ8TCT8 520 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 HPS1Q92902 700 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 PGM2Q96G03 612 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 HPDLQ96IR7 371 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 TPD52L3Q96J77 140 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 NUDT12Q9BQG2 462 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 C1orf50Q9BV19 199 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 TEX13BQ9BXU2 312 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 AVENQ9NQS1 362 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-223ENST00000529986 TBX20Q9UMR3 447 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 BTBD3Q9Y2F9 522 aa7.83□□□□□ -1.16
CTNND1-223ENST00000529986 FARP1Q9Y4F1 1045 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-223ENST00000529986 NPTXRO95502 500 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 ATP6V1C1P21283 382 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 NUP62P37198 522 aaPredicted RBP7.82□□□□□ -1.16
CTNND1-223ENST00000529986 PLK1P53350 603 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 MTTPP55157 894 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 C1DQ13901 141 aaKnown RBP7.82□□□□□ -1.16
CTNND1-223ENST00000529986 CARTPTQ16568 116 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 CCDC153Q494R4 210 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 ATF7IP2Q5U623 682 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 SCARA3Q6AZY7 606 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 CIAPIN1Q6FI81 312 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 EXOC3L1Q86VI1 746 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 EPHX4Q8IUS5 362 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 C10orf53Q8N6V4 93 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 SH3TC2Q8TF17 1288 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 FAM172AQ8WUF8 416 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 CKAP2Q8WWK9 683 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 VPS33AQ96AX1 596 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 MAGED4Q96JG8 741 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 ACOX2Q99424 681 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 FHDC1Q9C0D6 1143 aaPredicted RBP7.82□□□□□ -1.16
CTNND1-223ENST00000529986 RMND5AQ9H871 391 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 PIM2Q9P1W9 311 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 COMMD3-BMI1R4GMX3 469 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 CD163L1Q9NR16 1453 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 TBKBP1A7MCY6 615 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 TNPO2O14787 897 aaKnown RBP7.82□□□□□ -1.16
CTNND1-223ENST00000529986 TBX3O15119 743 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 TSPAN3O60637 253 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 SLC2A4P14672 509 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 RASA1P20936 1047 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 DRD4P21917 467 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 ABCG1P45844 678 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 NR6A1Q15406 480 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 NDUFA5Q16718 116 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 LINC00523Q86TU6 105 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 EID3Q8N140 333 aa7.82□□□□□ -1.16
CTNND1-223ENST00000529986 BPIFB6Q8NFQ5 453 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms