RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 RNF43Q68DV7 783 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 TTI2Q6NXR4 508 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 CYP2U1Q7Z449 544 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 METTL3Q86U44 580 aaKnown RBP8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 C12orf40Q86WS4 652 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 CREBRFQ8IUR6 639 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 SYT12Q8IV01 421 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 DENND1CQ8IV53 801 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 CCDC117Q8IWD4 279 aaPredicted RBP8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 PHTF2Q8N3S3 785 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 UBA3Q8TBC4 463 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 DDI1Q8WTU0 396 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 SLC35F5Q8WV83 523 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 HMGB4Q8WW32 186 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 AZIN2Q96A70 460 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 KCNK17Q96T54 332 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 TRIM62Q9BVG3 475 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 NUSAP1Q9BXS6 441 aaKnown RBP8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 ULBP1Q9BZM6 244 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 POLR3BQ9NW08 1133 aaPredicted RBP8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 KIAA1468Q9P260 1216 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 PLA2G4CQ9UP65 541 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 INVSQ9Y283 1065 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 COL4A2P08572 1712 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 GON4LQ3T8J9 2241 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 SPAG17Q6Q759 2223 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 PTPRDP23468 1912 aa8.19□□□□□ -1.1
CCDC90B-212ENST00000529312 MYOFQ9NZM1 2061 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 ZNF292O60281 2723 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 KIF26AQ9ULI4 1882 aaPredicted RBP8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 O00370 1275 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 MDM4O15151 490 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 SYNCRIPO60506 623 aaKnown RBP8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 ADAM23O75077 832 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 NDUFS2O75306 463 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 PENKP01210 267 aaPredicted RBP8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 KLKB1P03952 638 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 HMBSP08397 361 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 OXTRP30559 389 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 CORO1AP31146 461 aaKnown RBP8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 SLC11A2P49281 568 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 MARSP56192 900 aaKnown RBP8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 SFSWAPQ12872 951 aaKnown RBP8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 EIF4HQ15056 248 aaKnown RBP8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 SF3A2Q15428 464 aaKnown RBP8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 TRIP4Q15650 581 aaPredicted RBP8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 TPD52L1Q16890 204 aaPredicted RBP8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 PPM1JQ5JR12 505 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 SYCP2LQ5T4T6 812 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 ADGRF1Q5T601 910 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 NUGGCQ68CJ6 796 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 FMNL3Q8IVF7 1028 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 MLKLQ8NB16 471 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 MDGA1Q8NFP4 955 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 IPO4Q8TEX9 1081 aaKnown RBP8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 STK32AQ8WU08 396 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 PIGKQ92643 395 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 ERCC4Q92889 916 aaPredicted RBP8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 FOXJ1Q92949 421 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 WBP2Q969T9 261 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 MED15Q96RN5 788 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 ARID3AQ99856 593 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 LSM14BQ9BX40 385 aaKnown RBP8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 TPSD1Q9BZJ3 242 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 UBE2TQ9NPD8 197 aaPredicted RBP8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 TMEM51Q9NW97 253 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 ELOVL2Q9NXB9 296 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 CHMP5Q9NZZ3 219 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 THAP10Q9P2Z0 257 aaPredicted RBP8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 SUN2Q9UH99 717 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 SLC12A6Q9UHW9 1150 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 EVLQ9UI08 416 aaPredicted RBP8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 RWDD2AQ9UIY3 292 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 AGO1Q9UL18 857 aaKnown RBP8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 ABCA7Q8IZY2 2146 aa8.18□□□□□ -1.1
CCDC90B-212ENST00000529312 OBSL1O75147 1896 aa8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 MED19A0JLT2 244 aaPredicted RBP8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 TYW5A2RUC4 315 aaKnown RBP8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 BIN1O00499 593 aa8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 TM4SF5O14894 197 aa8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 IRAK2O43187 625 aa8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 GDF9O60383 454 aa8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 ATP5BP06576 529 aaKnown RBP8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 LCP1P13796 627 aa8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 GNSP15586 552 aa8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 HOXC13P31276 330 aa8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 RDXP35241 583 aaKnown RBP8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 ATXN3P54252 364 aaPredicted RBP8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 STX17P56962 302 aa8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 RING1Q06587 406 aa8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 ADIGQ0VDE8 80 aa8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 MTA1Q13330 715 aa8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 MEA1Q16626 185 aa8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 DUOXA1Q1HG43 343 aa8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 MAP7D1Q3KQU3 841 aa8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 PKDCCQ504Y2 493 aa8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 CT47A1Q5JQC4 288 aaPredicted RBP8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 WDR45BQ5MNZ6 344 aa8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 MPP7Q5T2T1 576 aa8.17□□□□□ -1.1
CCDC90B-212ENST00000529312 GBP6Q6ZN66 633 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms