RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 AZIN2Q96A70 460 aa19.48■□□□□ 0.71
PTPRK-218ENST00000525459 CALR3Q96L12 384 aaKnown RBP19.48■□□□□ 0.71
PTPRK-218ENST00000525459 CFAP57Q96MR6 1250 aa19.48■□□□□ 0.71
PTPRK-218ENST00000525459 NUP85Q9BW27 656 aa19.48■□□□□ 0.71
PTPRK-218ENST00000525459 PCDHA13Q9Y5I0 950 aa19.48■□□□□ 0.71
PTPRK-218ENST00000525459 TMEM191CA6NGB0 347 aa19.47■□□□□ 0.71
PTPRK-218ENST00000525459 MSI1O43347 362 aaKnown RBP19.47■□□□□ 0.71
PTPRK-218ENST00000525459 ENDOD1O94919 500 aa19.47■□□□□ 0.71
PTPRK-218ENST00000525459 IRF1P10914 325 aa19.47■□□□□ 0.71
PTPRK-218ENST00000525459 RDXP35241 583 aaKnown RBP19.47■□□□□ 0.71
PTPRK-218ENST00000525459 IFNAR2P48551 515 aa19.47■□□□□ 0.71
PTPRK-218ENST00000525459 RPL7AP62424 266 aaKnown RBP19.47■□□□□ 0.71
PTPRK-218ENST00000525459 ZXDBP98169 803 aa19.47■□□□□ 0.71
PTPRK-218ENST00000525459 DEUP1Q05D60 604 aa19.47■□□□□ 0.71
PTPRK-218ENST00000525459 TCEAL1Q15170 157 aa19.47■□□□□ 0.71
PTPRK-218ENST00000525459 BRMS1LQ5PSV4 323 aa19.47■□□□□ 0.71
PTPRK-218ENST00000525459 DNAAF5Q86Y56 855 aa19.47■□□□□ 0.71
PTPRK-218ENST00000525459 SLC44A3Q8N4M1 653 aa19.47■□□□□ 0.71
PTPRK-218ENST00000525459 OSCP1Q8WVF1 389 aa19.47■□□□□ 0.71
PTPRK-218ENST00000525459 IRF7Q92985 503 aa19.47■□□□□ 0.71
PTPRK-218ENST00000525459 RSPRY1Q96DX4 576 aa19.47■□□□□ 0.71
PTPRK-218ENST00000525459 SLC39A13Q96H72 371 aa19.47■□□□□ 0.71
PTPRK-218ENST00000525459 PACSIN1Q9BY11 444 aa19.47■□□□□ 0.71
PTPRK-218ENST00000525459 TRPV5Q9NQA5 729 aa19.47■□□□□ 0.71
PTPRK-218ENST00000525459 GKN1Q9NS71 199 aa19.47■□□□□ 0.71
PTPRK-218ENST00000525459 CTTNBP2NLQ9P2B4 639 aa19.47■□□□□ 0.71
PTPRK-218ENST00000525459 SLC12A6Q9UHW9 1150 aa19.47■□□□□ 0.71
PTPRK-218ENST00000525459 PFKPQ01813 784 aa19.46■□□□□ 0.71
PTPRK-218ENST00000525459 CCDC14Q49A88 953 aa19.46■□□□□ 0.71
PTPRK-218ENST00000525459 TRNP1Q6NT89 227 aa19.46■□□□□ 0.71
PTPRK-218ENST00000525459 ZNF564Q8TBZ8 553 aaPredicted RBP19.46■□□□□ 0.71
PTPRK-218ENST00000525459 ADAM32Q8TC27 787 aa19.46■□□□□ 0.71
PTPRK-218ENST00000525459 CENPIQ92674 756 aaPredicted RBP19.46■□□□□ 0.71
PTPRK-218ENST00000525459 DNASE1L2Q92874 299 aa19.46■□□□□ 0.71
PTPRK-218ENST00000525459 TBCBQ99426 244 aa19.46■□□□□ 0.71
PTPRK-218ENST00000525459 IRX2Q9BZI1 471 aaPredicted RBP19.46■□□□□ 0.71
PTPRK-218ENST00000525459 A0A0A6YYK5 440 aaPredicted RBP19.45■□□□□ 0.7
PTPRK-218ENST00000525459 MTA2O94776 668 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 SLC34A2O95436 690 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 SRFP11831 508 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 CORO1AP31146 461 aaKnown RBP19.45■□□□□ 0.7
PTPRK-218ENST00000525459 CHKAP35790 457 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 SLC11A2P49281 568 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 VAV2P52735 878 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 NME3Q13232 169 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 PIGHQ14442 188 aaPredicted RBP19.45■□□□□ 0.7
PTPRK-218ENST00000525459 OTUD1Q5VV17 481 aaPredicted RBP19.45■□□□□ 0.7
PTPRK-218ENST00000525459 Q6ZNB5 142 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 RNF135Q8IUD6 432 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 ATP6V0D2Q8N8Y2 350 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 ATP2A3Q93084 1043 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 ARHGEF26Q96DR7 871 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 BTN2A3PQ96KV6 586 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 FCRL2Q96LA5 508 aaPredicted RBP19.45■□□□□ 0.7
PTPRK-218ENST00000525459 UHRF1Q96T88 793 aaPredicted RBP19.45■□□□□ 0.7
PTPRK-218ENST00000525459 DDX50Q9BQ39 737 aaKnown RBP19.45■□□□□ 0.7
PTPRK-218ENST00000525459 BRD9Q9H8M2 597 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 IP6K2Q9UHH9 426 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 ANAPC7Q9UJX3 599 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 DUSP12Q9UNI6 340 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 NCOR1O75376 2440 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 RNF8O76064 485 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 GJB6O95452 261 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 NFATC1O95644 943 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 ASGR2P07307 311 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 HMBSP08397 361 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 PSMA2P25787 234 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 CXCR3P49682 368 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 AIF1P55008 147 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 PITX1P78337 314 aaPredicted RBP19.45■□□□□ 0.7
PTPRK-218ENST00000525459 GRM2Q14416 872 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 UBALD2Q8IYN6 164 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 NIPA2Q8N8Q9 360 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 TTC16Q8NEE8 873 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 FAM172AQ8WUF8 416 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 RSAD2Q8WXG1 361 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 RNF34Q969K3 372 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 PPP1R9BQ96SB3 815 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 PLA2G2FQ9BZM2 168 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 SLC2A4RGQ9NR83 387 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 PIGVQ9NUD9 493 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 DUS2Q9NX74 493 aaKnown RBP19.45■□□□□ 0.7
PTPRK-218ENST00000525459 STOML2Q9UJZ1 356 aa19.45■□□□□ 0.7
PTPRK-218ENST00000525459 UNC80Q8N2C7 3258 aa19.44■□□□□ 0.7
PTPRK-218ENST00000525459 KIAA1549LQ6ZVL6 1849 aa19.44■□□□□ 0.7
PTPRK-218ENST00000525459 MYO1FO00160 1098 aa19.44■□□□□ 0.7
PTPRK-218ENST00000525459 CCP110O43303 1012 aa19.44■□□□□ 0.7
PTPRK-218ENST00000525459 GREM1O60565 184 aa19.44■□□□□ 0.7
PTPRK-218ENST00000525459 GDI1P31150 447 aa19.44■□□□□ 0.7
PTPRK-218ENST00000525459 HADHBP55084 474 aaKnown RBP19.44■□□□□ 0.7
PTPRK-218ENST00000525459 CCZ1BP86790 482 aa19.44■□□□□ 0.7
PTPRK-218ENST00000525459 CCZ1P86791 482 aaPredicted RBP19.44■□□□□ 0.7
PTPRK-218ENST00000525459 ATP11AP98196 1134 aa19.44■□□□□ 0.7
PTPRK-218ENST00000525459 ARL13BQ3SXY8 428 aa19.44■□□□□ 0.7
PTPRK-218ENST00000525459 KIAA1328Q86T90 577 aa19.44■□□□□ 0.7
PTPRK-218ENST00000525459 RIN3Q8TB24 985 aa19.44■□□□□ 0.7
PTPRK-218ENST00000525459 LRRC3BQ96PB8 259 aa19.44■□□□□ 0.7
PTPRK-218ENST00000525459 FAM83CQ9BQN1 747 aa19.44■□□□□ 0.7
PTPRK-218ENST00000525459 RPP25Q9BUL9 199 aaKnown RBP19.44■□□□□ 0.7
PTPRK-218ENST00000525459 WDCPQ9H6R7 721 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms