RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 C2CD4BA6NLJ0 364 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 GOLGA6L6A8MZA4 724 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 GOLGA8SH3BPF8 625 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 M0R296 226 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 AKR1B10O60218 316 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 GPR37L1O60883 481 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 ENDOD1O94919 500 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 PDGFRAP16234 1089 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 CORO1AP31146 461 aaKnown RBP12.88□□□□□ -0.35
CCS-202ENST00000525435 CCR1P32246 355 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 PTPN9P43378 593 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 TNK2Q07912 1038 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 MAMLD1Q13495 774 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 PPP2R5DQ14738 602 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 DHCR24Q15392 516 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 C2CD6Q53TS8 623 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 PPP1R15BQ5SWA1 713 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 C10orf76Q5T2E6 689 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 DNAJC24Q6P3W2 148 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 RHBDF2Q6PJF5 856 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 ZNF852Q6ZMS4 543 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 SND1Q7KZF4 910 aaKnown RBP eCLIP12.88□□□□□ -0.35
CCS-202ENST00000525435 BNIPLQ7Z465 357 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 TAC4Q86UU9 113 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 DENND1CQ8IV53 801 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 BBS7Q8IWZ6 715 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 CCDC170Q8IYT3 715 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 TTC16Q8NEE8 873 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 FCRL2Q96LA5 508 aaPredicted RBP12.88□□□□□ -0.35
CCS-202ENST00000525435 DEF6Q9H4E7 631 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 EPHX3Q9H6B9 360 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 NHEJ1Q9H9Q4 299 aaPredicted RBP12.88□□□□□ -0.35
CCS-202ENST00000525435 MRPL47Q9HD33 250 aaKnown RBP12.88□□□□□ -0.35
CCS-202ENST00000525435 SPHK2Q9NRA0 654 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 HEBP1Q9NRV9 189 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 DDIT4Q9NX09 232 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 GTSE1Q9NYZ3 720 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 MARK1Q9P0L2 795 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 AGO1Q9UL18 857 aaKnown RBP12.88□□□□□ -0.35
CCS-202ENST00000525435 NENFQ9UMX5 172 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 PIAS3Q9Y6X2 628 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 OBSL1O75147 1896 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 NUP210Q8TEM1 1887 aaPredicted RBP12.87□□□□□ -0.35
CCS-202ENST00000525435 KRBA1A5PL33 1030 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 TMCO5BA8MYB1 307 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 KCNU1A8MYU2 1149 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 M0QYT0 321 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 HOXC11O43248 304 aaPredicted RBP12.87□□□□□ -0.35
CCS-202ENST00000525435 MSI1O43347 362 aaKnown RBP12.87□□□□□ -0.35
CCS-202ENST00000525435 APOEP02649 317 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 HMBSP08397 361 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 IRF1P10914 325 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 ARSAP15289 507 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 DESP17661 470 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 FECHP22830 423 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 RRM1P23921 792 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 SDC4P31431 198 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 RFC1P35251 1148 aaPredicted RBP12.87□□□□□ -0.35
CCS-202ENST00000525435 FLT3P36888 993 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 EIF2DP41214 584 aaKnown RBP12.87□□□□□ -0.35
CCS-202ENST00000525435 CXCR3P49682 368 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 CLCN5P51795 746 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 GAD2Q05329 585 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 PREPLQ4J6C6 727 aaPredicted RBP12.87□□□□□ -0.35
CCS-202ENST00000525435 BRMS1LQ5PSV4 323 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 CCDC122Q5T0U0 273 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 MPP7Q5T2T1 576 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 TRIM68Q6AZZ1 485 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 DCUN1D2Q6PH85 259 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 STRADAQ7RTN6 431 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 TMTC1Q8IUR5 882 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 SUGP1Q8IWZ8 645 aaKnown RBP12.87□□□□□ -0.35
CCS-202ENST00000525435 SIX5Q8N196 739 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 FNIP1Q8TF40 1166 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 RXFP2Q8WXD0 754 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 CENPIQ92674 756 aaPredicted RBP12.87□□□□□ -0.35
CCS-202ENST00000525435 WBP2Q969T9 261 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 BTN2A3PQ96KV6 586 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 CHP1Q99653 195 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 NCAPGQ9BPX3 1015 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 FAM204AQ9H8W3 233 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 SCINQ9Y6U3 715 aa12.87□□□□□ -0.35
CCS-202ENST00000525435 KANSL1LA0AUZ9 987 aa12.86□□□□□ -0.35
CCS-202ENST00000525435 TMEM191CA6NGB0 347 aa12.86□□□□□ -0.35
CCS-202ENST00000525435 OTOL1A6NHN0 477 aaPredicted RBP12.86□□□□□ -0.35
CCS-202ENST00000525435 SPECC1L-ADORA2AF8WAN1 911 aa12.86□□□□□ -0.35
CCS-202ENST00000525435 GFRA2O00451 464 aa12.86□□□□□ -0.35
CCS-202ENST00000525435 TRDMT1O14717 391 aaKnown RBP12.86□□□□□ -0.35
CCS-202ENST00000525435 NCAM2O15394 837 aa12.86□□□□□ -0.35
CCS-202ENST00000525435 ACSL4O60488 711 aa12.86□□□□□ -0.35
CCS-202ENST00000525435 ABCB4P21439 1286 aa12.86□□□□□ -0.35
CCS-202ENST00000525435 CTHP32929 405 aa12.86□□□□□ -0.35
CCS-202ENST00000525435 GJA4P35212 333 aa12.86□□□□□ -0.35
CCS-202ENST00000525435 ZNF143P52747 638 aaPredicted RBP12.86□□□□□ -0.35
CCS-202ENST00000525435 CCDC14Q49A88 953 aa12.86□□□□□ -0.35
CCS-202ENST00000525435 ZC3H12AQ5D1E8 599 aaKnown RBP12.86□□□□□ -0.35
CCS-202ENST00000525435 LY6G5CQ5SRR4 150 aa12.86□□□□□ -0.35
CCS-202ENST00000525435 ATP6V0D2Q8N8Y2 350 aa12.86□□□□□ -0.35
CCS-202ENST00000525435 CCDC26Q8TAB7 109 aa12.86□□□□□ -0.35
CCS-202ENST00000525435 ADAM32Q8TC27 787 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms