RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 MESP2Q0VG99 397 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 EFEMP1Q12805 493 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 GRM2Q14416 872 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 TAF12Q16514 161 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 ATP13A4Q4VNC1 1196 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 DCAF6Q58WW2 860 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 C10orf120Q5SQS8 335 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 HECTD3Q5T447 861 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 BTBD8Q5XKL5 378 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 TRIM68Q6AZZ1 485 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 NADSYN1Q6IA69 706 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 CES5AQ6NT32 575 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 MSANTD2Q6P1R3 559 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 VITQ6UXI7 678 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 H2AFVQ71UI9 128 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 MIB1Q86YT6 1006 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 TMTC1Q8IUR5 882 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 FMNL3Q8IVF7 1028 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 REXO1L1PQ8IX06 675 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 CMTM8Q8IZV2 173 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 ELMOD1Q8N336 334 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 C3orf20Q8ND61 904 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 TTC16Q8NEE8 873 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 SH3RF2Q8TEC5 729 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 IRGQQ8WZA9 623 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 NT5C3BQ969T7 300 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 ZFYVE19Q96K21 471 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 FCRL2Q96LA5 508 aaPredicted RBP6.77□□□□□ -1.33
CD44-214ENST00000525211 RIPOR3Q96MK2 946 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 SLITRK1Q96PX8 696 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 PHF7Q9BWX1 381 aaPredicted RBP6.77□□□□□ -1.33
CD44-214ENST00000525211 DEF6Q9H4E7 631 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 FBXO44Q9H4M3 255 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 TASP1Q9H6P5 420 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 SYNCQ9H7C4 482 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 TLR8Q9NR97 1041 aaKnown RBP6.77□□□□□ -1.33
CD44-214ENST00000525211 PIGVQ9NUD9 493 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 ZNHIT6Q9NWK9 470 aaKnown RBP6.77□□□□□ -1.33
CD44-214ENST00000525211 GPATCH2LQ9NWQ4 482 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 COX16Q9P0S2 106 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 MAP10Q9P2G4 905 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 CEP83Q9Y592 693 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.77□□□□□ -1.33
CD44-214ENST00000525211 MYO10Q9HD67 2058 aa6.77□□□□□ -1.33
CD44-214ENST00000525211 SLC12A8A0AV02 714 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 ANKRD62A6NC57 917 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 SHISA7A6NL88 538 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 SIGLEC16A6NMB1 481 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 TMEM110-MUSTN1A8MSY1 372 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 HEPACAM2A8MVW5 462 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 LOC730098B7Z3J9 87 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 ANHXE9PGG2 379 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 LEFTY2O00292 366 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 IRAK2O43187 625 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 BUB1O43683 1085 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 TRUB2O95900 331 aaKnown RBP6.76□□□□□ -1.33
CD44-214ENST00000525211 ADH1BP00325 375 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 IGLV3-27P01718 113 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 CALB1P05937 261 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 TMEM253P0C7T8 217 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 MBL2P11226 248 aaPredicted RBP6.76□□□□□ -1.33
CD44-214ENST00000525211 KRT3P12035 628 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 PDGFRAP16234 1089 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 IL1R2P27930 398 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 CDC25CP30307 473 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 MATKP42679 507 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 SULT1E1P49888 294 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 MMP16P51512 607 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 VCPP55072 806 aaKnown RBP6.76□□□□□ -1.33
CD44-214ENST00000525211 SLC8A3P57103 927 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 TAS2R40P59535 323 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 YWHAZP63104 245 aaKnown RBP6.76□□□□□ -1.33
CD44-214ENST00000525211 GPC5P78333 572 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 SLC7A9P82251 487 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 ZP2Q05996 745 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 TNK2Q07912 1038 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 USP4Q13107 963 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 NME3Q13232 169 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 HTR4Q13639 388 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 ZNF77Q15935 545 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 CA9Q16790 459 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 CDO1Q16878 200 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 GAB4Q2WGN9 574 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 ZC3H12AQ5D1E8 599 aaKnown RBP6.76□□□□□ -1.33
CD44-214ENST00000525211 TJAP1Q5JTD0 557 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 EFHC1Q5JVL4 640 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 FAM182AQ5T1J6 154 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 DNAJC24Q6P3W2 148 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 ANKS1BQ7Z6G8 1248 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 C14orf80Q86SX3 495 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 FAM131BQ86XD5 332 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 SFTPA1Q8IWL2 248 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 BBS7Q8IWZ6 715 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 CCDC170Q8IYT3 715 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 PYROXD2Q8N2H3 581 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 CCDC185Q8N715 623 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 TTC8Q8TAM2 541 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 SLC35G2Q8TBE7 412 aa6.76□□□□□ -1.33
CD44-214ENST00000525211 IPO4Q8TEX9 1081 aaKnown RBP6.76□□□□□ -1.33
CD44-214ENST00000525211 OVCA2Q8WZ82 227 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms