RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 MRPS35P82673 323 aaKnown RBP9.22□□□□□ -0.93
PKP3-202ENST00000524646 GBE1Q04446 702 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 NIPAL4Q0D2K0 466 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 BST2Q10589 180 aaKnown RBP9.22□□□□□ -0.93
PKP3-202ENST00000524646 WASHC5Q12768 1159 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 KPNB1Q14974 876 aaKnown RBP9.22□□□□□ -0.93
PKP3-202ENST00000524646 NBPF20Q3BBV1 942 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 ACSBG2Q5FVE4 666 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 PPP6R3Q5H9R7 873 aaPredicted RBP9.22□□□□□ -0.93
PKP3-202ENST00000524646 STXBP5Q5T5C0 1151 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 NCBP2-AS2Q69YL0 99 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 PMF1Q6P1K2 205 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 TRMT10BQ6PF06 316 aaKnown RBP9.22□□□□□ -0.93
PKP3-202ENST00000524646 KYAT3Q6YP21 454 aaKnown RBP9.22□□□□□ -0.93
PKP3-202ENST00000524646 ARMCX2Q7L311 632 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 ACOT1Q86TX2 421 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 NUDCD3Q8IVD9 361 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 ARID3BQ8IVW6 561 aaPredicted RBP9.22□□□□□ -0.93
PKP3-202ENST00000524646 KIRREL3Q8IZU9 778 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 SMC1BQ8NDV3 1235 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 STKLD1Q8NE28 680 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 PPTC7Q8NI37 304 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 MICAL1Q8TDZ2 1067 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 SLC35F5Q8WV83 523 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 NLRP7Q8WX94 980 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 CENPIQ92674 756 aaPredicted RBP9.22□□□□□ -0.93
PKP3-202ENST00000524646 KHSRPQ92945 711 aaKnown RBP eCLIP9.22□□□□□ -0.93
PKP3-202ENST00000524646 EMID1Q96A84 441 aaPredicted RBP9.22□□□□□ -0.93
PKP3-202ENST00000524646 SPATA13Q96N96 652 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 OLFM3Q96PB7 478 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 CSPG4P5Q96PW8 444 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 FAM167BQ9BTA0 163 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 RNPEPQ9H4A4 650 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 DHX35Q9H5Z1 703 aaKnown RBP9.22□□□□□ -0.93
PKP3-202ENST00000524646 STN1Q9H668 368 aaKnown RBP9.22□□□□□ -0.93
PKP3-202ENST00000524646 PLEKHA5Q9HAU0 1116 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 VTA1Q9NP79 307 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 PDGFCQ9NRA1 345 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 ZFATQ9P243 1243 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 GTF2IRD1Q9UHL9 959 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 TAGLN3Q9UI15 199 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 ANGPTL2Q9UKU9 493 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 LRCH1Q9Y2L9 728 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 NME7Q9Y5B8 376 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 MAD1L1Q9Y6D9 718 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 USP3Q9Y6I4 520 aa9.22□□□□□ -0.93
PKP3-202ENST00000524646 MYO16Q9Y6X6 1858 aa9.21□□□□□ -0.93
PKP3-202ENST00000524646 A6NHS1 94 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 PPEF2O14830 753 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 MFSD11O43934 449 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 OPHN1O60890 802 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 CSDE1O75534 798 aaKnown RBP9.21□□□□□ -0.94
PKP3-202ENST00000524646 DAB1O75553 588 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 GABBR2O75899 941 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 STK10O94804 968 aaKnown RBP9.21□□□□□ -0.94
PKP3-202ENST00000524646 MAP3K6O95382 1288 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 NPTXRO95502 500 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 ENO1P06733 434 aaKnown RBP9.21□□□□□ -0.94
PKP3-202ENST00000524646 PGAM1P18669 254 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 PAX7P23759 505 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 PGM1P36871 562 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 ACADSBP45954 432 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 RPL34P49207 117 aaKnown RBP9.21□□□□□ -0.94
PKP3-202ENST00000524646 SARNPP82979 210 aaKnown RBP9.21□□□□□ -0.94
PKP3-202ENST00000524646 SLC34A1Q06495 639 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 TRMT5Q32P41 509 aaKnown RBP9.21□□□□□ -0.94
PKP3-202ENST00000524646 CES4AQ5XG92 561 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 HEATR6Q6AI08 1181 aaKnown RBP9.21□□□□□ -0.94
PKP3-202ENST00000524646 TRIM68Q6AZZ1 485 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 CAPRIN2Q6IMN6 1127 aaKnown RBP9.21□□□□□ -0.94
PKP3-202ENST00000524646 ANO7Q6IWH7 933 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 IRGCQ6NXR0 463 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 POTEAQ6S8J7 498 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 MTHFD1LQ6UB35 978 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 KCNT2Q6UVM3 1135 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 LRRC74BQ6ZQY2 392 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 DENND5BQ6ZUT9 1274 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 PAXIP1Q6ZW49 1069 aaPredicted RBP9.21□□□□□ -0.94
PKP3-202ENST00000524646 CYS1Q717R9 158 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 STRADAQ7RTN6 431 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 NET1Q7Z628 596 aaPredicted RBP9.21□□□□□ -0.94
PKP3-202ENST00000524646 TREML1Q86YW5 311 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 HACE1Q8IYU2 909 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 NDUFAF2Q8N183 169 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 MPP5Q8N3R9 675 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 PDCD7Q8N8D1 485 aaKnown RBP9.21□□□□□ -0.94
PKP3-202ENST00000524646 C12orf29Q8N999 325 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 BEST2Q8NFU1 509 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 GTF3C2Q8WUA4 911 aaPredicted RBP9.21□□□□□ -0.94
PKP3-202ENST00000524646 CDKL2Q92772 493 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 ZNF560Q96MR9 790 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 DNAI2Q9GZS0 605 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 MTMR10Q9NXD2 777 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 TAS2R1Q9NYW7 299 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 ARMCX1Q9P291 453 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 STX18Q9P2W9 335 aaKnown RBP9.21□□□□□ -0.94
PKP3-202ENST00000524646 RBPJLQ9UBG7 517 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 MORF4L1Q9UBU8 362 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 TUBGCP4Q9UGJ1 667 aa9.21□□□□□ -0.94
PKP3-202ENST00000524646 PLA2G4CQ9UP65 541 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms