RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 UNC93AQ86WB7 457 aa8.59□□□□□ -1.03
CHD7-202ENST00000524602 ARMC2Q8NEN0 867 aa8.59□□□□□ -1.03
CHD7-202ENST00000524602 SLC35F5Q8WV83 523 aa8.59□□□□□ -1.03
CHD7-202ENST00000524602 CENPIQ92674 756 aaPredicted RBP8.59□□□□□ -1.03
CHD7-202ENST00000524602 ZCWPW1Q9H0M4 648 aa8.59□□□□□ -1.03
CHD7-202ENST00000524602 THAP1Q9NVV9 213 aa8.59□□□□□ -1.03
CHD7-202ENST00000524602 NMRK1Q9NWW6 199 aa8.59□□□□□ -1.03
CHD7-202ENST00000524602 MOCS1Q9NZB8 636 aa8.59□□□□□ -1.03
CHD7-202ENST00000524602 HESX1Q9UBX0 185 aa8.59□□□□□ -1.03
CHD7-202ENST00000524602 SERPINA6P08185 405 aa8.59□□□□□ -1.04
CHD7-202ENST00000524602 ARF4P18085 180 aaPredicted RBP8.59□□□□□ -1.04
CHD7-202ENST00000524602 GRM5P41594 1212 aa8.59□□□□□ -1.04
CHD7-202ENST00000524602 AP1B1Q10567 949 aa8.59□□□□□ -1.04
CHD7-202ENST00000524602 CHI3L2Q15782 390 aa8.59□□□□□ -1.04
CHD7-202ENST00000524602 TRMT5Q32P41 509 aaKnown RBP8.59□□□□□ -1.04
CHD7-202ENST00000524602 DCAF4L1Q3SXM0 396 aa8.59□□□□□ -1.04
CHD7-202ENST00000524602 THEMIS2Q5TEJ8 643 aa8.59□□□□□ -1.04
CHD7-202ENST00000524602 SNX30Q5VWJ9 437 aa8.59□□□□□ -1.04
CHD7-202ENST00000524602 TRIM68Q6AZZ1 485 aa8.59□□□□□ -1.04
CHD7-202ENST00000524602 ZNF534Q76KX8 674 aa8.59□□□□□ -1.04
CHD7-202ENST00000524602 MARK2Q7KZI7 788 aaKnown RBP8.59□□□□□ -1.04
CHD7-202ENST00000524602 PPFIBP2Q8ND30 876 aa8.59□□□□□ -1.04
CHD7-202ENST00000524602 PIWIL1Q96J94 861 aaKnown RBP8.59□□□□□ -1.04
CHD7-202ENST00000524602 MMP19Q99542 508 aa8.59□□□□□ -1.04
CHD7-202ENST00000524602 C11orf84Q9BUA3 381 aaPredicted RBP8.59□□□□□ -1.04
CHD7-202ENST00000524602 DNAI2Q9GZS0 605 aa8.59□□□□□ -1.04
CHD7-202ENST00000524602 EIF2B3Q9NR50 452 aaKnown RBP8.59□□□□□ -1.04
CHD7-202ENST00000524602 ARHGEF4Q9NR80 690 aa8.59□□□□□ -1.04
CHD7-202ENST00000524602 RCOR3Q9P2K3 495 aaPredicted RBP8.59□□□□□ -1.04
CHD7-202ENST00000524602 ANGPTL2Q9UKU9 493 aa8.59□□□□□ -1.04
CHD7-202ENST00000524602 A0A087WZ62 844 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 ASB14A6NK59 587 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 CSH1P0DML2 217 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 CSH2P0DML3 217 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 L1CAMP32004 1257 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 HDAC4P56524 1084 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 LAMC2Q13753 1193 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 PPP1R26Q5T8A7 1209 aaPredicted RBP8.58□□□□□ -1.04
CHD7-202ENST00000524602 ARHGAP17Q68EM7 881 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 PMF1Q6P1K2 205 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 LRRC74BQ6ZQY2 392 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 DPH6Q7L8W6 267 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 SLC26A9Q7LBE3 791 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 ERO1BQ86YB8 467 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 ANKRD13AQ8IZ07 590 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 NDUFAF2Q8N183 169 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 STKLD1Q8NE28 680 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 ZNF483Q8TF39 744 aaPredicted RBP8.58□□□□□ -1.04
CHD7-202ENST00000524602 DEPDC1BQ8WUY9 529 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 KHSRPQ92945 711 aaKnown RBP eCLIP8.58□□□□□ -1.041e-8■■■■■ 28.9
CHD7-202ENST00000524602 FDXACB1Q9BRP7 624 aaPredicted RBP8.58□□□□□ -1.04
CHD7-202ENST00000524602 NAT9Q9BTE0 207 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 VCXQ9H320 206 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 MROH8Q9H579 483 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 SMYD2Q9NRG4 433 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 HBS1LQ9Y450 684 aaKnown RBP8.58□□□□□ -1.04
CHD7-202ENST00000524602 SPECC1L-ADORA2AF8WAN1 911 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 CXCL11O14625 94 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 CAPN9O14815 690 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 GRAP2O75791 330 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 CIB2O75838 187 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 INSRRP14616 1297 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 RPL34P49207 117 aaKnown RBP8.58□□□□□ -1.04
CHD7-202ENST00000524602 STX3Q13277 289 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 RAB6CQ53S08 254 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 HEATR6Q6AI08 1181 aaKnown RBP8.58□□□□□ -1.04
CHD7-202ENST00000524602 ALYREFQ86V81 257 aaKnown RBP8.58□□□□□ -1.04
CHD7-202ENST00000524602 TTC30AQ86WT1 665 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 PSTKQ8IV42 348 aaKnown RBP8.58□□□□□ -1.04
CHD7-202ENST00000524602 ARID3BQ8IVW6 561 aaPredicted RBP8.58□□□□□ -1.04
CHD7-202ENST00000524602 FBXO16Q8IX29 292 aaPredicted RBP8.58□□□□□ -1.04
CHD7-202ENST00000524602 LRRC52Q8N7C0 313 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 PDCD7Q8N8D1 485 aaKnown RBP8.58□□□□□ -1.04
CHD7-202ENST00000524602 SPDYE1Q8NFV5 336 aaPredicted RBP8.58□□□□□ -1.04
CHD7-202ENST00000524602 CDKL2Q92772 493 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 ATP2A3Q93084 1043 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 FAM136AQ96C01 138 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 ZNF668Q96K58 619 aaPredicted RBP8.58□□□□□ -1.04
CHD7-202ENST00000524602 FERMT1Q9BQL6 677 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 RAB6CQ9H0N0 254 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 RNPEPQ9H4A4 650 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 MAD1L1Q9Y6D9 718 aa8.58□□□□□ -1.04
CHD7-202ENST00000524602 SPDYE5A6NIY4 337 aa8.57□□□□□ -1.04
CHD7-202ENST00000524602 B2RBV5 119 aa8.57□□□□□ -1.04
CHD7-202ENST00000524602 PAPSS1O43252 624 aaPredicted RBP8.57□□□□□ -1.04
CHD7-202ENST00000524602 GLRA3O75311 464 aa8.57□□□□□ -1.04
CHD7-202ENST00000524602 TM7SF2O76062 418 aa8.57□□□□□ -1.04
CHD7-202ENST00000524602 PGK2P07205 417 aa8.57□□□□□ -1.04
CHD7-202ENST00000524602 AOC1P19801 751 aa8.57□□□□□ -1.04
CHD7-202ENST00000524602 CA9Q16790 459 aa8.57□□□□□ -1.04
CHD7-202ENST00000524602 SYCP2LQ5T4T6 812 aa8.57□□□□□ -1.04
CHD7-202ENST00000524602 TTC7BQ86TV6 843 aa8.57□□□□□ -1.04
CHD7-202ENST00000524602 WDR75Q8IWA0 830 aaKnown RBP8.57□□□□□ -1.04
CHD7-202ENST00000524602 ZNF513Q8N8E2 541 aaPredicted RBP8.57□□□□□ -1.04
CHD7-202ENST00000524602 KIF12Q96FN5 646 aa8.57□□□□□ -1.04
CHD7-202ENST00000524602 PRR11Q96HE9 360 aaPredicted RBP8.57□□□□□ -1.04
CHD7-202ENST00000524602 CPB2Q96IY4 423 aa8.57□□□□□ -1.04
CHD7-202ENST00000524602 CCDC106Q9BWC9 280 aa8.57□□□□□ -1.04
CHD7-202ENST00000524602 SLC13A1Q9BZW2 595 aa8.57□□□□□ -1.04
CHD7-202ENST00000524602 GPAMQ9HCL2 828 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms