RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 UNC93B1Q9H1C4 597 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 METTL18O95568 372 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 AMHP03971 560 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 MSH2P43246 934 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 PGFP49763 221 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 RNASEH2BQ5TBB1 312 aaKnown RBP12.18□□□□□ -0.46
PTPRK-216ENST00000524481 ZCCHC9Q8N567 271 aaKnown RBP12.18□□□□□ -0.46
PTPRK-216ENST00000524481 ZMIZ2Q8NF64 920 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 MYCBPAPQ8TBZ2 947 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 GIPC2Q8TF65 315 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 RNF139Q8WU17 664 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 BHMTQ93088 406 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 NKD2Q969F2 451 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-216ENST00000524481 SLC13A1Q9BZW2 595 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 NACA2Q9H009 215 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 PRDM12Q9H4Q4 367 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 PRDM5Q9NQX1 630 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-216ENST00000524481 PCDHB7Q9Y5E2 793 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 A0A087WUV0 522 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-216ENST00000524481 TCP11X1B4DZS4 312 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 ATP9BO43861 1147 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 NOS2P35228 1153 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 MBTPS1Q14703 1052 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 PDK2Q15119 407 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 SLC25A52Q3SY17 297 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 RHBDF2Q6PJF5 856 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 CYP4V2Q6ZWL3 525 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-216ENST00000524481 VPS52Q8N1B4 723 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 PRCCQ92733 491 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-216ENST00000524481 TXLNGYQ9BZA5 131 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 PSD3Q9NYI0 1048 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 DRG1Q9Y295 367 aaKnown RBP12.17□□□□□ -0.46
PTPRK-216ENST00000524481 ZSWIM8A7E2V4 1837 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 GOLGA6L7A0A1B0GV03 622 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 MFSD11O43934 449 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 TPH1P17752 444 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 WARSP23381 471 aaKnown RBP12.17□□□□□ -0.46
PTPRK-216ENST00000524481 DNAJB2P25686 324 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 ITKQ08881 620 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 MORF4L2Q15014 288 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 NOMO1Q15155 1222 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 KIAA1841Q6NSI8 718 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 TFAP2DQ7Z6R9 452 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 UNC5BQ8IZJ1 945 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 URGCPQ8TCY9 931 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 CCHCR1Q8TD31 782 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 ZNF473Q8WTR7 871 aaKnown RBP12.17□□□□□ -0.46
PTPRK-216ENST00000524481 RSPH1Q8WYR4 309 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 SMARCD1Q96GM5 515 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 KLC2Q9H0B6 622 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 STMN4Q9H169 189 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-216ENST00000524481 EPN3Q9H201 632 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 ATXN3LQ9H3M9 355 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 CHST12Q9NRB3 414 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 OR12D3Q9UGF7 316 aa12.17□□□□□ -0.46
PTPRK-216ENST00000524481 TBKBP1A7MCY6 615 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 GOLGA8TH3BQL2 631 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 CPP00450 1065 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 NUDT17P0C025 328 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 ERCC2P18074 760 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 KRT4P19013 534 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 STIP1P31948 543 aaKnown RBP12.16□□□□□ -0.46
PTPRK-216ENST00000524481 ABCG1P45844 678 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 CTXN3Q4LDR2 81 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 NOMO2Q5JPE7 1267 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 SLC24A5Q71RS6 500 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 ANLNQ9NQW6 1124 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 DTLQ9NZJ0 730 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 MPP6Q9NZW5 540 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 UNC80Q8N2C7 3258 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 CDH16O75309 829 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 STAU1O95793 577 aaKnown RBP12.16□□□□□ -0.46
PTPRK-216ENST00000524481 ATP2A2P16615 1042 aaKnown RBP12.16□□□□□ -0.46
PTPRK-216ENST00000524481 LRPAP1P30533 357 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 CYP2C18P33260 490 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 BMPR2Q13873 1038 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 ACAP1Q15027 740 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 AGBL2Q5U5Z8 902 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 LRRC34Q8IZ02 419 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 OTUD6BQ8N6M0 293 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 TFB1MQ8WVM0 346 aaKnown RBP12.16□□□□□ -0.46
PTPRK-216ENST00000524481 XPO6Q96QU8 1125 aaKnown RBP12.16□□□□□ -0.46
PTPRK-216ENST00000524481 TBC1D13Q9NVG8 400 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 ZC3H7BQ9UGR2 993 aaKnown RBP12.16□□□□□ -0.46
PTPRK-216ENST00000524481 C9IYK1 514 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 INHBAP08476 426 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 DAOAP59103 153 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 KBTBD12Q3ZCT8 623 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 COLGALT1Q8NBJ5 622 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 SMC6Q96SB8 1091 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 TRABDQ9H4I3 376 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 FGFR1OP2Q9NVK5 253 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 SLC17A6Q9P2U8 582 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 ATP11BQ9Y2G3 1177 aa12.16□□□□□ -0.46
PTPRK-216ENST00000524481 AGTP01019 485 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 JCHAINP01591 159 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 ADRA1BP35368 520 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 EFEMP1Q12805 493 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 MPP2Q14168 576 aa12.15□□□□□ -0.46
PTPRK-216ENST00000524481 TAF12Q16514 161 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms