RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 KANSL1LA0AUZ9 987 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 PRR33A8MZF0 331 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 M0QYT0 321 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 TSPAN3O60637 253 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 MOCS2O96007 188 aaPredicted RBP13.35□□□□□ -0.27
VEGFA-224ENST00000523873 CALB1P05937 261 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 DCNP07585 359 aaKnown RBP13.35□□□□□ -0.27
VEGFA-224ENST00000523873 TPM1P09493 284 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 ADH5P11766 374 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 RRM1P23921 792 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 NOS2P35228 1153 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 SCNN1AP37088 669 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 EIF4A3P38919 411 aaKnown RBP13.35□□□□□ -0.27
VEGFA-224ENST00000523873 MATKP42679 507 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 SLC6A11P48066 632 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 ATXN1P54253 815 aaKnown RBP13.35□□□□□ -0.27
VEGFA-224ENST00000523873 NME3Q13232 169 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 ANO4Q32M45 955 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 RAB6CQ53S08 254 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 ZC3H12AQ5D1E8 599 aaKnown RBP13.35□□□□□ -0.27
VEGFA-224ENST00000523873 RALGPS2Q86X27 583 aaPredicted RBP13.35□□□□□ -0.27
VEGFA-224ENST00000523873 FBXL6Q8N531 539 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 KIAA1958Q8N8K9 716 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 NAT16Q8N8M0 369 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 TMEM105Q8N8V8 129 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 OR8K1Q8NGG5 319 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 SLC39A13Q96H72 371 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 MRFAP1L1Q96HT8 127 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 SHDQ96IW2 340 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 CFAP57Q96MR6 1250 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 TBCBQ99426 244 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 NPY6RQ99463 290 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 DNAJC7Q99615 494 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 CHP1Q99653 195 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 TRIM62Q9BVG3 475 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 SELENOOQ9BVL4 669 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 DCLK3Q9C098 648 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 RAB6CQ9H0N0 254 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 C8orf33Q9H7E9 229 aaPredicted RBP13.35□□□□□ -0.27
VEGFA-224ENST00000523873 FBRSL1Q9HCM7 1045 aaKnown RBP13.35□□□□□ -0.27
VEGFA-224ENST00000523873 SPHK2Q9NRA0 654 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 RBM12Q9NTZ6 932 aaKnown RBP13.35□□□□□ -0.27
VEGFA-224ENST00000523873 DDIT4Q9NX09 232 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 PLK2Q9NYY3 685 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 ADAMTS1Q9UHI8 967 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 XPO7Q9UIA9 1087 aaKnown RBP13.35□□□□□ -0.27
VEGFA-224ENST00000523873 TLR6Q9Y2C9 796 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 A0A0C4DFX4 3053 aa13.35□□□□□ -0.27
VEGFA-224ENST00000523873 A0A087X0T9 212 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 TCRBV5S1A1TA0A578 114 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 ANTXRLA6NF34 631 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 FAM170BA6NMN3 283 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 AKR1B15C9JRZ8 316 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-224ENST00000523873 NEDD8-MDP1E9PL57 170 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 MAN2B1O00754 1011 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 ADCY5O95622 1261 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 FTLP02792 175 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-224ENST00000523873 FAM228BP0C875 321 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 SLC6A4P31645 630 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 HNRNPH3P31942 346 aaKnown RBP13.34□□□□□ -0.27
VEGFA-224ENST00000523873 OPRD1P41143 372 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 HARS2P49590 506 aaKnown RBP13.34□□□□□ -0.27
VEGFA-224ENST00000523873 C1QBPQ07021 282 aaKnown RBP13.34□□□□□ -0.27
VEGFA-224ENST00000523873 EIF4EBP2Q13542 120 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-224ENST00000523873 ARID5BQ14865 1188 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 C15orf59Q2T9L4 293 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-224ENST00000523873 NADSYN1Q6IA69 706 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 DNAJC24Q6P3W2 148 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 ZNF852Q6ZMS4 543 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 BMP8AQ7Z5Y6 402 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 CCDC105Q8IYK2 499 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 PJA1Q8NG27 643 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 RXFP2Q8WXD0 754 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 OTUB2Q96DC9 234 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 MYEOVQ96EZ4 313 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 WDR35Q9P2L0 1181 aa13.34□□□□□ -0.27
VEGFA-224ENST00000523873 BZW2Q9Y6E2 419 aaKnown RBP13.34□□□□□ -0.27
VEGFA-224ENST00000523873 TRIM24O15164 1050 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 ACSL4O60488 711 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 RTN2O75298 545 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 ADH1CP00326 375 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 EGFP01133 1207 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 KRT3P12035 628 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 GLULP15104 373 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 ABCB4P21439 1286 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 RFC1P35251 1148 aaPredicted RBP13.33□□□□□ -0.28
VEGFA-224ENST00000523873 GALK1P51570 392 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 SGSHP51688 502 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 GSCP56915 257 aaPredicted RBP13.33□□□□□ -0.28
VEGFA-224ENST00000523873 ATP11AP98196 1134 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 GAD2Q05329 585 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 KDSRQ06136 332 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 GFPT1Q06210 699 aaPredicted RBP13.33□□□□□ -0.28
VEGFA-224ENST00000523873 RING1Q06587 406 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 MESP2Q0VG99 397 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 NR1H3Q13133 447 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 NNTQ13423 1086 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 FZD5Q13467 585 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 CDO1Q16878 200 aa13.33□□□□□ -0.28
VEGFA-224ENST00000523873 SH3PXD2AQ5TCZ1 1133 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms