RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 ZNF778Q96MU6 729 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 ASB2Q96Q27 587 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 DDX23Q9BUQ8 820 aaKnown RBP4.67□□□□□ -1.66
SQLE-204ENST00000520493 SORBS1Q9BX66 1292 aaKnown RBP4.67□□□□□ -1.66
SQLE-204ENST00000520493 TRIM5Q9C035 493 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 PCDHAC1Q9H158 963 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 TMX4Q9H1E5 349 aaPredicted RBP4.67□□□□□ -1.66
SQLE-204ENST00000520493 SAYSD1Q9NPB0 183 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 ZMYND8Q9ULU4 1186 aaPredicted RBP4.67□□□□□ -1.66
SQLE-204ENST00000520493 RPS6KL1Q9Y6S9 549 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 TISP43B9A030 160 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 PIP5K1BO14986 540 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 EXOC3O60645 756 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 USP1O94782 785 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 LATS1O95835 1130 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 CSF1RP07333 972 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 KCNA3P22001 575 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 CST5P28325 142 aaPredicted RBP4.66□□□□□ -1.66
SQLE-204ENST00000520493 ADORA2AP29274 412 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 MPGP29372 298 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 PRKAR1BP31321 381 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 PTDSS1P48651 473 aaKnown RBP4.66□□□□□ -1.66
SQLE-204ENST00000520493 MTHFSP49914 203 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 SUMO2P61956 95 aaKnown RBP4.66□□□□□ -1.66
SQLE-204ENST00000520493 ADCK5Q3MIX3 580 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 MORN5Q5VZ52 161 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 ZNF626Q68DY1 528 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 JMJD6Q6NYC1 403 aaPredicted RBP4.66□□□□□ -1.66
SQLE-204ENST00000520493 SERPINA13PQ6UXR4 307 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 C1QL2Q7Z5L3 287 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 YTHDF3Q7Z739 585 aaKnown RBP4.66□□□□□ -1.66
SQLE-204ENST00000520493 RAB11FIP4Q86YS3 637 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 CCDC28AQ8IWP9 274 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 SIRT6Q8N6T7 355 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 IPO4Q8TEX9 1081 aaKnown RBP4.66□□□□□ -1.66
SQLE-204ENST00000520493 RPL36ALQ969Q0 106 aaKnown RBP4.66□□□□□ -1.66
SQLE-204ENST00000520493 NUDT22Q9BRQ3 303 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 TP63Q9H3D4 680 aaPredicted RBP4.66□□□□□ -1.66
SQLE-204ENST00000520493 ITM2CQ9NQX7 267 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 KIF17Q9P2E2 1029 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 GABRQQ9UN88 632 aa4.66□□□□□ -1.66
SQLE-204ENST00000520493 COL3A1P02461 1466 aaPredicted RBP4.65□□□□□ -1.66
SQLE-204ENST00000520493 POC1B-GALNT4F8VUJ3 575 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 IPO5O00410 1097 aaKnown RBP4.65□□□□□ -1.67
SQLE-204ENST00000520493 RRP9O43818 475 aaKnown RBP4.65□□□□□ -1.67
SQLE-204ENST00000520493 CCNT2O60583 730 aaKnown RBP4.65□□□□□ -1.67
SQLE-204ENST00000520493 AGR2O95994 175 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 LDHCP07864 332 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 CHRM5P08912 532 aaPredicted RBP4.65□□□□□ -1.67
SQLE-204ENST00000520493 MYCLP12524 364 aaPredicted RBP4.65□□□□□ -1.67
SQLE-204ENST00000520493 ATICP31939 592 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 PTGER1P34995 402 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 CDK7P50613 346 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 ATP1A4Q13733 1029 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 CCNIQ14094 377 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 TMTC4Q5T4D3 741 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 RAP1GAP2Q684P5 730 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 DENND2CQ68D51 928 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 SLC18B1Q6NT16 456 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 KLHL17Q6TDP4 642 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 CRTC1Q6UUV9 634 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 KIRREL2Q6UWL6 708 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 ZNF66Q6ZN08 573 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 USP49Q70CQ1 688 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 NRSN1Q8IZ57 195 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 GALNT4Q8N4A0 578 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 TERB1Q8NA31 727 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 DENND1AQ8TEH3 1009 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 STYXQ8WUJ0 223 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 PPP2R3CQ969Q6 453 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 RSPRY1Q96DX4 576 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 SNX18Q96RF0 628 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 PRPF18Q99633 342 aaKnown RBP4.65□□□□□ -1.67
SQLE-204ENST00000520493 FAM167BQ9BTA0 163 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 UNC45AQ9H3U1 944 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 RRN3Q9NYV6 651 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 FBXO2Q9UK22 296 aaPredicted RBP4.65□□□□□ -1.67
SQLE-204ENST00000520493 SLC13A4Q9UKG4 626 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 TMEM98Q9Y2Y6 226 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 SNX14Q9Y5W7 946 aa4.65□□□□□ -1.67
SQLE-204ENST00000520493 SETD1BQ9UPS6 1966 aaKnown RBP4.64□□□□□ -1.67
SQLE-204ENST00000520493 AQP12BA6NM10 295 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 H7C4K7 107 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 J3KRW8 73 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 TRIM38O00635 465 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 ASNA1O43681 348 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 PIAS2O75928 621 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 PDE8BO95263 885 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 MST1P26927 711 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 PLCD1P51178 756 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 EIF5P55010 431 aaKnown RBP4.64□□□□□ -1.67
SQLE-204ENST00000520493 E2F1Q01094 437 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 TAF12Q16514 161 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 ZIK1Q3SY52 487 aaPredicted RBP4.64□□□□□ -1.67
SQLE-204ENST00000520493 TRIM60Q495X7 471 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 LCE1EQ5T753 118 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 ATPAF1Q5TC12 328 aaPredicted RBP4.64□□□□□ -1.67
SQLE-204ENST00000520493 MANEALQ5VSG8 457 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 SLC9A4Q6AI14 798 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 ZNF425Q6IV72 752 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms