RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 PIGKQ92643 395 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 KAT5Q92993 513 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 HSFY1Q96LI6 401 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 FAM81BQ96LP2 452 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 UBE2TQ9NPD8 197 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-215ENST00000515516 SFMBT1Q9UHJ3 866 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 FBXO10Q9UK96 956 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 SLC27A6Q9Y2P4 619 aa14.28□□□□□ -0.12
TCOF1-215ENST00000515516 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.27□□□□□ -0.13
TCOF1-215ENST00000515516 PIK3R2O00459 728 aa14.27□□□□□ -0.13
TCOF1-215ENST00000515516 AP5Z1O43299 807 aa14.27□□□□□ -0.13
TCOF1-215ENST00000515516 TIMM44O43615 452 aa14.27□□□□□ -0.13
TCOF1-215ENST00000515516 GABRG2P18507 467 aa14.27□□□□□ -0.13
TCOF1-215ENST00000515516 MFAP3P55082 362 aa14.27□□□□□ -0.13
TCOF1-215ENST00000515516 MAP7D1Q3KQU3 841 aa14.27□□□□□ -0.13
TCOF1-215ENST00000515516 PPM1JQ5JR12 505 aa14.27□□□□□ -0.13
TCOF1-215ENST00000515516 PMF1Q6P1K2 205 aa14.27□□□□□ -0.13
TCOF1-215ENST00000515516 BHLHA9Q7RTU4 235 aa14.27□□□□□ -0.13
TCOF1-215ENST00000515516 ANKS1BQ7Z6G8 1248 aa14.27□□□□□ -0.13
TCOF1-215ENST00000515516 TMEFF1Q8IYR6 380 aa14.27□□□□□ -0.13
TCOF1-215ENST00000515516 ACOX2Q99424 681 aa14.27□□□□□ -0.13
TCOF1-215ENST00000515516 GABRG3Q99928 467 aa14.27□□□□□ -0.13
TCOF1-215ENST00000515516 EDEM2Q9BV94 578 aa14.27□□□□□ -0.13
TCOF1-215ENST00000515516 SLC2A11Q9BYW1 496 aa14.27□□□□□ -0.13
TCOF1-215ENST00000515516 CACNA2D2Q9NY47 1150 aa14.27□□□□□ -0.13
TCOF1-215ENST00000515516 WDR87Q6ZQQ6 2873 aa14.27□□□□□ -0.13
TCOF1-215ENST00000515516 A0A1W2PQF6 199 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 SART1O43290 800 aaKnown RBP14.26□□□□□ -0.13
TCOF1-215ENST00000515516 SYNCRIPO60506 623 aaKnown RBP14.26□□□□□ -0.13
TCOF1-215ENST00000515516 TSPAN3O60637 253 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 LATS1O95835 1130 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 LTFP02788 710 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 ACADSBP45954 432 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 SLC11A2P49281 568 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 ZNF132P52740 706 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 RPL6Q02878 288 aaKnown RBP14.26□□□□□ -0.13
TCOF1-215ENST00000515516 LYSMD4Q5XG99 296 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 TCEAL6Q6IPX3 200 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 ARMCX6Q7L4S7 300 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 UNC45BQ8IWX7 931 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 MLKLQ8NB16 471 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 TCEAL3Q969E4 200 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 TMA16Q96EY4 203 aaKnown RBP14.26□□□□□ -0.13
TCOF1-215ENST00000515516 CIPCQ9C0C6 399 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 MIS12Q9H081 205 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 ST7Q9NRC1 585 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 RXFP3Q9NSD7 469 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 CALCOCO1Q9P1Z2 691 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 HCN2Q9UL51 889 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 RAD54BQ9Y620 910 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 STON1Q9Y6Q2 735 aa14.26□□□□□ -0.13
TCOF1-215ENST00000515516 FRYLO94915 3013 aa14.25□□□□□ -0.13
TCOF1-215ENST00000515516 LETM1O95202 739 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-215ENST00000515516 CALCAP01258 141 aa14.25□□□□□ -0.13
TCOF1-215ENST00000515516 NCAM1P13591 858 aa14.25□□□□□ -0.13
TCOF1-215ENST00000515516 USP8P40818 1118 aa14.25□□□□□ -0.13
TCOF1-215ENST00000515516 MTIF2P46199 727 aaKnown RBP14.25□□□□□ -0.13
TCOF1-215ENST00000515516 EIF4HQ15056 248 aaKnown RBP14.25□□□□□ -0.13
TCOF1-215ENST00000515516 GEN1Q17RS7 908 aa14.25□□□□□ -0.13
TCOF1-215ENST00000515516 ADGRF1Q5T601 910 aa14.25□□□□□ -0.13
TCOF1-215ENST00000515516 DAB2IPQ5VWQ8 1189 aa14.25□□□□□ -0.13
TCOF1-215ENST00000515516 NUGGCQ68CJ6 796 aa14.25□□□□□ -0.13
TCOF1-215ENST00000515516 KIAA1324Q6UXG2 1013 aaKnown RBP14.25□□□□□ -0.13
TCOF1-215ENST00000515516 GBP6Q6ZN66 633 aa14.25□□□□□ -0.13
TCOF1-215ENST00000515516 SYT12Q8IV01 421 aa14.25□□□□□ -0.13
TCOF1-215ENST00000515516 FAM217AQ8IXS0 508 aa14.25□□□□□ -0.13
TCOF1-215ENST00000515516 FRMD1Q8N878 549 aa14.25□□□□□ -0.13
TCOF1-215ENST00000515516 ERLEC1Q96DZ1 483 aa14.25□□□□□ -0.13
TCOF1-215ENST00000515516 KREMEN1Q96MU8 473 aa14.25□□□□□ -0.13
TCOF1-215ENST00000515516 DDX50Q9BQ39 737 aaKnown RBP14.25□□□□□ -0.13
TCOF1-215ENST00000515516 ZSWIM1Q9BR11 485 aa14.25□□□□□ -0.13
TCOF1-215ENST00000515516 CRACR2AQ9BSW2 395 aa14.25□□□□□ -0.13
TCOF1-215ENST00000515516 TRIM62Q9BVG3 475 aa14.25□□□□□ -0.13
TCOF1-215ENST00000515516 NUSAP1Q9BXS6 441 aaKnown RBP14.25□□□□□ -0.13
TCOF1-215ENST00000515516 ELOVL2Q9NXB9 296 aa14.25□□□□□ -0.13
TCOF1-215ENST00000515516 THAP10Q9P2Z0 257 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-215ENST00000515516 MBD1Q9UIS9 605 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-215ENST00000515516 WASH3PC4AMC7 463 aa14.24□□□□□ -0.13
TCOF1-215ENST00000515516 CAPN9O14815 690 aa14.24□□□□□ -0.13
TCOF1-215ENST00000515516 MSI1O43347 362 aaKnown RBP14.24□□□□□ -0.13
TCOF1-215ENST00000515516 THAP12O43422 761 aa14.24□□□□□ -0.13
TCOF1-215ENST00000515516 NDUFS2O75306 463 aa14.24□□□□□ -0.13
TCOF1-215ENST00000515516 NDUFV2P19404 249 aa14.24□□□□□ -0.13
TCOF1-215ENST00000515516 GNA15P30679 374 aa14.24□□□□□ -0.13
TCOF1-215ENST00000515516 PTGER3P43115 390 aa14.24□□□□□ -0.13
TCOF1-215ENST00000515516 TBX4P57082 545 aa14.24□□□□□ -0.13
TCOF1-215ENST00000515516 LMAN2Q12907 356 aa14.24□□□□□ -0.13
TCOF1-215ENST00000515516 KIAA1211LQ6NV74 962 aa14.24□□□□□ -0.13
TCOF1-215ENST00000515516 MSANTD2Q6P1R3 559 aa14.24□□□□□ -0.13
TCOF1-215ENST00000515516 FAM114A1Q8IWE2 563 aa14.24□□□□□ -0.13
TCOF1-215ENST00000515516 FAM149B1Q96BN6 582 aa14.24□□□□□ -0.13
TCOF1-215ENST00000515516 PIWIL1Q96J94 861 aaKnown RBP14.24□□□□□ -0.13
TCOF1-215ENST00000515516 TMEM9BQ9NQ34 198 aa14.24□□□□□ -0.13
TCOF1-215ENST00000515516 DACH1Q9UI36 760 aa14.24□□□□□ -0.13
TCOF1-215ENST00000515516 STOML2Q9UJZ1 356 aa14.24□□□□□ -0.13
TCOF1-215ENST00000515516 CYP8B1Q9UNU6 501 aa14.24□□□□□ -0.13
TCOF1-215ENST00000515516 PLA2G4CQ9UP65 541 aa14.24□□□□□ -0.13
TCOF1-215ENST00000515516 CNTN6Q9UQ52 1028 aa14.24□□□□□ -0.13
TCOF1-215ENST00000515516 CEP250Q9BV73 2442 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 ATG2BQ96BY7 2078 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms