RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 EPS15L1Q9UBC2 864 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 TRIM10Q9UDY6 481 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 MACROD2A1Z1Q3 448 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 GRID2IPA4D2P6 1211 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 KCNU1A8MYU2 1149 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 LRCH4O75427 683 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 CKMP06732 381 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 GJA1P17302 382 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 TFE3P19532 575 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 CCR1P32246 355 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 DEKP35659 375 aaKnown RBP12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 AVPR1AP37288 418 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 DEUP1Q05D60 604 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 SCAPQ12770 1279 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 SMAD2Q15796 467 aaKnown RBP12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 C15orf59Q2T9L4 293 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 STXBP5Q5T5C0 1151 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 NUGGCQ68CJ6 796 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 POTEHQ6S545 545 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 EP400NLQ6ZTU2 488 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 SND1Q7KZF4 910 aaKnown RBP eCLIP12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 OTOP3Q7RTS5 596 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 POLNQ7Z5Q5 900 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 UNC45BQ8IWX7 931 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 ARL14EPQ8N8R7 260 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 TRIM58Q8NG06 486 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 SMARCD2Q92925 531 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 FCRL2Q96LA5 508 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 ASB16Q96NS5 453 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 IRX2Q9BZI1 471 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 DCLK3Q9C098 648 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 FAM204AQ9H8W3 233 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 TRPC7Q9HCX4 862 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 LZTFL1Q9NQ48 299 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 PIGVQ9NUD9 493 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 TDP1Q9NUW8 608 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 DDIT4Q9NX09 232 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 ARHGEF38Q9NXL2 777 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 SFMBT1Q9UHJ3 866 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 RAPGEFL1Q9UHV5 662 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 RASAL2Q9UJF2 1139 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 STOML2Q9UJZ1 356 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 GUCA1BQ9UMX6 200 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 FAM50BQ9Y247 325 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 DOCK4Q8N1I0 1966 aa12.46□□□□□ -0.41
PDLIM5-220ENST00000514830 E2F8A0AVK6 867 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 USP27XA6NNY8 438 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 H3BQ06 376 aaPredicted RBP12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 BUB1O43683 1085 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 GREM1O60565 184 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 MOCS3O95396 460 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 MBL2P11226 248 aaPredicted RBP12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 LAMP2P13473 410 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 TBX4P57082 545 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 ATP11AP98196 1134 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 SLC25A11Q02978 314 aaKnown RBP12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 TFF2Q03403 129 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 USP4Q13107 963 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 MESDQ14696 234 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 BOLA3Q53S33 107 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 SH3PXD2AQ5TCZ1 1133 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 HTR3DQ70Z44 454 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 DAAM2Q86T65 1068 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 ARID3BQ8IVW6 561 aaPredicted RBP12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 CELF5Q8N6W0 485 aaKnown RBP12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 ZSCAN18Q8TBC5 510 aaPredicted RBP12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 TEKT4Q8WW24 435 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 USP13Q92995 863 aaPredicted RBP12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 CD101Q93033 1021 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 BTBD6Q96KE9 485 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 ZSWIM3Q96MP5 696 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 ALS2CR12Q96Q35 445 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 CYP2S1Q96SQ9 504 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 NACA2Q9H009 215 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 CDH22Q9UJ99 828 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 NUDT5Q9UKK9 219 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 ZNF510Q9Y2H8 683 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 CPQQ9Y646 472 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 ALG6Q9Y672 507 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 CAPN6Q9Y6Q1 641 aa12.45□□□□□ -0.42
PDLIM5-220ENST00000514830 SLC12A8A0AV02 714 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 MIF4GDA9UHW6 222 aaKnown RBP12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 MDM4O15151 490 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 MSI1O43347 362 aaKnown RBP12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 PSTPIP1O43586 416 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 STC2O76061 302 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 COMTP21964 271 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 FCARP24071 287 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 MSNP26038 577 aaKnown RBP12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 MIPP30301 263 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 ADRA1BP35368 520 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 KCNQ1P51787 676 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 ZNF135P52742 658 aaPredicted RBP12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 NAP1L1P55209 391 aaKnown RBP12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 ZXDBP98169 803 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 NRG1Q02297 640 aaPredicted RBP12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 CLUL1Q15846 466 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 ZNF77Q15935 545 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 HADHQ16836 314 aaKnown RBP12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 ARL13BQ3SXY8 428 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms