RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	TWNK	Q96RR1	684 aa		3.88	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	WDR24	Q96S15	920 aa		3.88	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	INO80B	Q9C086	356 aa	Predicted RBP	3.88	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	KLK15	Q9H2R5	256 aa		3.88	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CXorf36	Q9H7Y0	433 aa		3.88	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	NOD2	Q9HC29	1040 aa		3.88	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CPNE5	Q9HCH3	593 aa		3.88	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	VPS45	Q9NRW7	570 aa		3.88	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TBC1D22B	Q9NU19	505 aa		3.88	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TMLHE	Q9NVH6	421 aa		3.88	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	COL15A1	P39059	1388 aa		3.88	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	PNMA6E	A0A0J9YXQ4	647 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	WDR27	A2RRH5	827 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	FAM90A18P	A6NE21	464 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	FAM90A16P	A6NEW6	464 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	FAM90A9P	A6NNJ1	464 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	FAM90A5P	A8MXJ8	464 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TISP43	B9A030	160 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267		J3KTA2	159 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TSPAN3	O60637	253 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	SRGAP2	O75044	1071 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	LARGE1	O95461	756 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CNP	P09543	421 aa	Known RBP	3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	FAM90A15P	P0C7V4	464 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	FAM90A14P	P0C7W9	464 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	GYS1	P13807	737 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ZFX	P17010	805 aa	Predicted RBP	3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	LMO1	P25800	156 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	RBL1	P28749	1068 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	EPHA3	P29320	983 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	LIFR	P42702	1097 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	PRKAA2	P54646	552 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CSHL1	Q14406	222 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	KCTD2	Q14681	263 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ANKRD1	Q15327	319 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	SMAD1	Q15797	465 aa	Known RBP	3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	COLEC12	Q5KU26	742 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ZNF362	Q5T0B9	420 aa	Predicted RBP	3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ICE2	Q659A1	982 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	FCRLB	Q6BAA4	426 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	RINT1	Q6NUQ1	792 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	FAM180B	Q6P0A1	224 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CEP85	Q6P2H3	762 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ANKRD16	Q6P6B7	361 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	MTHFD1L	Q6UB35	978 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TBC1D1	Q86TI0	1168 aa	Predicted RBP	3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	SRRM1	Q8IYB3	904 aa	Known RBP	3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	DNAJB14	Q8TBM8	379 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TFAP2B	Q92481	460 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	RILPL2	Q969X0	211 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	LRIG1	Q96JA1	1093 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	OSBPL5	Q9H0X9	879 aa	Predicted RBP	3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	PRDM13	Q9H4Q3	707 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TRIM36	Q9NQ86	728 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	RXFP3	Q9NSD7	469 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	SMC4	Q9NTJ3	1288 aa		3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	NDRG4	Q9ULP0	352 aa	Known RBP	3.87	□□□□□ -1.79
CALCOCO2-223	ENST00000514267		A0A087X0M5	115 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267		A0A1B0GX30	115 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	SAC3D1	A6NKF1	404 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ADM5	C9JUS6	153 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ZSCAN9	O15535	394 aa	Predicted RBP	3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TIMM44	O43615	452 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	PRKCG	P05129	697 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CSF1R	P07333	972 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CHRM2	P08172	466 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	IFIT1	P09914	478 aa	Known RBP	3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CD19	P15391	556 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	NDUFB7	P17568	137 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CHRM3	P20309	590 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	KLRK1	P26718	216 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	GATM	P50440	423 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	PDE6C	P51160	858 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CCR5	P51681	352 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	PGD	P52209	483 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	MC2R	Q01718	297 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	PRKG2	Q13237	762 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	SLC12A1	Q13621	1099 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TBRG1	Q3YBR2	411 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TMEM63B	Q5T3F8	832 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	RBM20	Q5T481	1227 aa	Known RBP	3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TSTD2	Q5T7W7	516 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CFAP161	Q6P656	301 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	SLC30A10	Q6XR72	485 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TRABD2A	Q86V40	505 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	FAM109A	Q8N4B1	249 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	NTN5	Q8WTR8	489 aa	Predicted RBP	3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	RFFL	Q8WZ73	363 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	COG8	Q96MW5	612 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	C7orf26	Q96N11	449 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	HIST1H2AA	Q96QV6	131 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TREX2	Q9BQ50	279 aa	Predicted RBP	3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	PAAF1	Q9BRP4	392 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ACTRT3	Q9BYD9	372 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	VPS16	Q9H269	839 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	SMOC2	Q9H3U7	446 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	EPS8L2	Q9H6S3	715 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ELAC1	Q9H777	363 aa	Known RBP	3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	GBA2	Q9HCG7	927 aa	Predicted RBP	3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms